Query= MSMg01no121_o02.b1 MSMg01no121_o02.b1 CHROMAT_FILE:
MSMg01no121_o02.b1 PHD_FILE: MSMg01no121_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:48 2005
(325 letters)
>mm_chr10_84143392_84144117
Length = 726
Score = 576 bits (298), Expect = e-169
Identities = 319/326 (97%), Gaps = 1/326 (0%)
Strand = Plus / Plus
Query: 1 atctctgcgcctcatatgtgcagcatgaactcaggatgccaatgtgttcatgatatttct 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 atctctgcgcctcatatgtgcagtgtgaactcaggatgccaatgtgttcatgatatttct 260
Query: 61 tctaccacagtggcacgttagaagcatctgtgttctgtttgggagacattagacgacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctaccacagtggcacgttagaagcatctgtgttctgtttgggagacattagacgacatc 320
Query: 121 tgcacagcttgctctgtgacacaagtcattaatgtaccacttgcccgaaactggaacttt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcacagctcgctctgtgacacaagtcattaatgtaccacttgcccgaaactggaacttt 380
Query: 181 tgcagttatatttttaaaggggaatttaatagtcatacttgataactatttatatcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcagttatatttttaaaggggaatttaatagtcatacttgataactatttatatcttca 440
Query: 241 gtctcaagcaaataatttttt-ctttttgctactacatgaaatatatatttgtattataa 299
||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 gtctcaagcgaataatttttttctttttgctactagatgaaatatatatttgtattataa 500
Query: 300 tatttgtatatatttgtattataatt 325
||||||||||||||||||||| ||||
Sbjct: 501 tatttgtatatatttgtattacaatt 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space: 226572
Effective search space used: 226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no121_o02.g1 MSMg01no121_o02.g1 CHROMAT_FILE:
MSMg01no121_o02.g1 PHD_FILE: MSMg01no121_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:48 2005
(381 letters)
>mm_chr10_84190091_84190868
Length = 778
Score = 671 bits (347), Expect = 0.0
Identities = 371/381 (97%), Gaps = 5/381 (1%)
Strand = Plus / Minus
Query: 1 ctctatcagacaggtgctgggctggagagatggctcaaaggttaagaacactgactgctc 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ctctatcag--aggtgctgggctggagagatggctcaaaggttaagaacactgactgctc 690
Query: 61 ttccagaggtcccgagttcaattcccagcaaccacatggtggctcactaccatctataag 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttccagaggtcctgagttcaattcccagcaaccacatggtggctcactaccatctataag 630
Query: 121 gagatctgactccctcctctggtgtgtctgaagacagtgacaggtgctaactctccagat 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gagatttgactccctcctctggtgtgtctgaagacagtgacaggtgctaactctccagat 570
Query: 181 gatcacaaccgcctgggatggctgaaactgttcatctacaggaaactcaacgctcagtgg 240
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 569 gatcacaactgcctgggatggctgaaactgttcatctacaggaaactcaacactcagtgg 510
Query: 241 aatctgaatttctaagaaggaccactgtcgtcgaaccatggattaagccacacaggcccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aatctgaatttctaagaaggaccactgtcgtcgaaccatggattaagccacacaggcccg 450
Query: 301 aggttttgtagctcttgccatccccttgtggtagtgttgtgcggggtggggttggggttg 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 449 aggttttgtagctcttgc---ccccttgtggtagtgttgtgcggggtggggttgtggttg 393
Query: 361 gggcttggctactctgcctca 381
|||||||||||||||||||||
Sbjct: 392 gggcttggctactctgcctca 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 778
Length adjustment: 9
Effective length of query: 372
Effective length of database: 769
Effective search space: 286068
Effective search space used: 286068
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
