Query= MSMg01no122_g14.b1 MSMg01no122_g14.b1 CHROMAT_FILE:
MSMg01no122_g14.b1 PHD_FILE: MSMg01no122_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:50 2005
(733 letters)
>mm_chr10_32565010_32566141
Length = 1132
Score = 1328 bits (687), Expect = 0.0
Identities = 720/733 (98%), Gaps = 5/733 (0%)
Strand = Plus / Plus
Query: 1 atacaactctcaagttttattaatgaatacatgcactatgtagatgggtatactgtaaat 60
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 201 atacaactctcaagttttattaatgaatacatgaa-tatgtagatgggtatactgtaaat 259
Query: 61 aaagcaacatcattttcttcttattcacacaaaacaactttgttatcagtatgccctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaagcaacatcattttcttcttattcacacaaaacaactttgttatcagtatgccctcaa 319
Query: 121 aactatgttcaaaatataggcacagcgaaggactttataaaatattgaaacttatagcac 180
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 320 aactatgttcaaaatataggcacagcgaaggactttatgaaatattgaaatttatagcac 379
Query: 181 aaataaatagagattaatgcgaacaacacctgagtctttgaaaagataacagaatccata 240
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 380 aaataaatagagattaatgcgatcaacatctgagtctttgaaaagataacagaatccata 439
Query: 241 gtcaaggtgaattagaaaagataaaatgtaaatcactttcaaatttgcaaaatgagacag 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcaaggtgaataagaaaagataaaatgtaaatcactttcaaatttgcaaaatgagacag 499
Query: 301 ttaggatcctatagacaataaagggttaggggaagagtactaagaataacttttagccaa 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttaggatcctatagataataaagggttaggggaagagtactaagaataacttttagccaa 559
Query: 361 gtggactgaaatgaactcaaagacatacactaccaaatttacagagaagctacacacaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtggactgaaatgaactcaaagacatacactaccaaatttacagagaagctacacacaca 619
Query: 421 cacacacacacatacacacatacacacacataaacaatcttccaaaataaaaaatgatcc 480
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cacacaca----tacacacatacacacacataaacaatcttccaaaataaaaaatgatcc 675
Query: 481 agatttgttcattagtaaatttaaatgaacatttaaagaaagactccaatcccaaaatca 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 676 agatttgttcattagtaaatttaaatgaacatttaaagaaagactccaataccaaaatca 735
Query: 541 cacaattattttattttacaggaaagaaaaactgaaggtaataactctaatatatagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cacaattattttattttacaggaaagaaaaactgaaggtaataactctaatatatagaaa 795
Query: 601 tcacgtaagaattcagagaaactgtggcagcattcacaggggtctcagtgctgagagaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tcacgtaagaattcagagaaactgtggcagcattcacaggggtctcagtgctgagagaaa 855
Query: 661 gagaagatgcaagccccatccctaacccagaatccacatctacatccaattgataaccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gagaagatgcaagccccatccctaacccagaatccacatctacatccaattgataaccac 915
Query: 721 tcacaaatgaaaa 733
|||||||||||||
Sbjct: 916 tcacaaatgaaaa 928
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 733
Length of database: 1132
Length adjustment: 10
Effective length of query: 723
Effective length of database: 1122
Effective search space: 811206
Effective search space used: 811206
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no122_g14.g1 MSMg01no122_g14.g1 CHROMAT_FILE:
MSMg01no122_g14.g1 PHD_FILE: MSMg01no122_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:50 2005
(637 letters)
>mm_chr10_32772491_32773532
Length = 1042
Score = 1040 bits (538), Expect = 0.0
Identities = 611/646 (94%), Gaps = 22/646 (3%)
Strand = Plus / Minus
Query: 1 caatattgtaaatcgtcaccttttctgaaacactttgacctttcatttgaatctccaaat 60
|||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||||
Sbjct: 952 caatattgtaaatcatcaccatttctgaaatgctttgtcctttcatttgaatctccaaat 893
Query: 61 gtaaaacaca--------acacatacacacacacacacaca-----a-acacaaacacaa 106
|||||||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 892 gtaaaacacaacacatacacacatacacacacacacacacacacacacacacaaacacaa 833
Query: 107 acacacacctgacaaatgcctttcaatacaattctttgaaagtactttaatttttcttaa 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 acacacacctgacaaatgcctttcaatacaattctttgaaagtactttaatttttcttaa 773
Query: 167 gtgttttgttgctgctgttgtttctagaatggggatctgtgtaaattggacacatgagcc 226
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gtattttgttgctgctattgtttctagaatggggatctgtgtaaattggacacatgagcc 713
Query: 227 taacatctagtcaggtttcaacaaggaaaacttaaattttacaaggagacctagtaattc 286
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 712 taacatctagtcaggtttcaagaaggaaaacttaaattttacaaggagacctagtaattc 653
Query: 287 attcttctggttgggagactgtagtgagctctgga-----gttttaggaaaatgaattat 341
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 652 attcttctggttgggagactgtagtgagctctggaccactgttttaggaaaatgaattat 593
Query: 342 ggacattgtgcctacaaaatagttccatgaagaaaatctaccatctcaagtaccaaatgg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ggacattgtgcctacaaaatagttccatgaagaaaatctaccatctcaagtaccaaatgg 533
Query: 402 gcagaatgttaaagttctctattttccccccataaatacccttctttaactacaattgct 461
|||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 532 gcagaatgttaaagttctctattttccctccataaatgcccttcttcaactacaattgct 473
Query: 462 gaattcagtactgaactaaaacttggaaggttggtgataaagttaccatttaaaagaaca 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaattcagtactgaactaaaacttggaaggttggtgataaagttaccatttaaaagaaca 413
Query: 522 cttagctagcaatggtcttcactaagactgagatggagtatggttggcagagcctttgta 581
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 412 cttagctagcaatggtcttcactaagactgagagggagtatggttggcagagcctttgta 353
Query: 582 ttgcactgcatcattcctagaaaggagga--gggtg-aggaagagg 624
||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 352 ttgcactgcatcattcctagaaaggaggatggggaggaggaagagg 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1042
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1032
Effective search space: 647064
Effective search space used: 647064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
