Query= MSMg01no123_d07.b1 MSMg01no123_d07.b1 CHROMAT_FILE:
MSMg01no123_d07.b1 PHD_FILE: MSMg01no123_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:36 2005
(373 letters)
>mm_chr10_18516153_18516925
Length = 773
Score = 652 bits (337), Expect = 0.0
Identities = 352/359 (98%), Gaps = 4/359 (1%)
Strand = Plus / Minus
Query: 19 aattctagccttcgctatcacctatcctctaggaataaagctgttacttttactgtctcc 78
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aattctagcctttgctatcacctatcctctaggaataaagctgttacttttactgtctcc 457
Query: 79 atggcttctgtctttcctagtattcaattcattgcccatgcaagggaacagctcagccat 138
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 456 atggcttctgtctttcctagtattcaattcattgttcatgcaagggaacagctcagccat 397
Query: 139 ctatataactcctcagcctcattgtgtaactcatgtatgtggcctccataatgcttcaca 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctatataactcctcagcctcattgtgtaactcatgtatgtggcctccataatgcttcaca 337
Query: 199 ggaagtttctagaagtagagtgggtttgaagggctgtgacattaaatttgtcacaagttg 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggaagtttctagaagtagagtgggtttgaagggctgtgacattaaatttgtcacaagttg 277
Query: 259 caatgttagcctggctaaatcactcaattttgtaaacactgag----acacacacacaca 314
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 276 caatgttagcctggctaaatcactcaattttgtaaacactgagacacacacacacacaca 217
Query: 315 cagagtatgggtgaatgaatgaatgaatgaatgaatgtaggtgatcagacaatgccagg 373
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cagagtatgggtgaatgaatgaatgaatgaatgaatgtaggtgatcagacaatgccagg 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_d07.g1 MSMg01no123_d07.g1 CHROMAT_FILE:
MSMg01no123_d07.g1 PHD_FILE: MSMg01no123_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:37 2005
(329 letters)
>mm_chr10_18358020_18358748
Length = 729
Score = 598 bits (309), Expect = e-175
Identities = 324/329 (98%)
Strand = Plus / Plus
Query: 1 aatgcagatctgcaactgcaacatttatccctaactgcgaagtttaatgtgctagtaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgcagatctgcaactgcaacatttatccctaactgcgaagtttaatgtgctagtaaga 260
Query: 61 aggtagggacccaaaagctatcgaggttggaaagaactggagttcaccagcttatgtgag 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 aggtagggacccaaaagctttcgaggttggaaagaactggagttcaccagcttatgtaag 320
Query: 121 tatgaatgccatctaggtatatcctccttaggccacactcagtgaggaacagcctggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgaatgccatctaggtatatcctccttaggccacactcagtgaggaacagcctggttg 380
Query: 181 cagagcactgtcagaacactgcagcccgtccagaccatactgagagcactttgtgaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagcactgtcagaacactgcagcccgtccagaccatactgagagcactttgtgaccat 440
Query: 241 gcacacaagacctattattttattcctgccatgtcctctccttctcctcgataactccct 300
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 441 gcacacaagacctattattttattcctgccatgtcctctccaactcctcaataactccct 500
Query: 301 gtttgattactactgttgcacacaaacac 329
|||||||||||||||||||||||||||||
Sbjct: 501 gtttgattactactgttgcacacaaacac 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
