Query= MSMg01no123_e08.b1 MSMg01no123_e08.b1 CHROMAT_FILE:
MSMg01no123_e08.b1 PHD_FILE: MSMg01no123_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:46 2005
(322 letters)
>mm_chr10_12307730_12308451
Length = 722
Score = 561 bits (290), Expect = e-164
Identities = 317/330 (96%), Gaps = 8/330 (2%)
Strand = Plus / Minus
Query: 1 tcaatacatgatcggttgggagatcggaggctcattttcattgtgtttagccaacgtgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tcaatacatgatcggttgggagatcggaggctcattttcattgtgtttagccaacgtgtc 409
Query: 61 ctgtgtgtttcactgggccctgacttgcatctttccacacgtggcaagttaatgatttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctgtgtgtttcactgggccctgacttgcatctttccacacgtggcaagttaatgatttga 349
Query: 121 atccacttttgattgaatcgatccattattgtgttactctgtgggcagcaagcaaggcac 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 atccacttttgcttgaatcgatccattattgtgttactctgtgggcagcaagcaaggcac 289
Query: 181 tccctaggagagagacctgttgtgtaacacaagtaacatcaggaaatgacattttacgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tccctaggagagagacctgttgtgtaacacaagtaacatcaggaaatgacattttacgtt 229
Query: 241 atctccttgtctccctgttcagtcacca--c------tatttgttaactattgggaagct 292
|||||||||||||||||||||||||||| | ||| ||||||||||||||||||
Sbjct: 228 atctccttgtctccctgttcagtcaccagtcagttaatatcagttaactattgggaagct 169
Query: 293 cctctatctcagcttacacgtgatgtgtcc 322
|||||||||||| ||||||| |||||||||
Sbjct: 168 cctctatctcagtttacacgagatgtgtcc 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_e08.g1 MSMg01no123_e08.g1 CHROMAT_FILE:
MSMg01no123_e08.g1 PHD_FILE: MSMg01no123_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:46 2005
(596 letters)
>mm_chr10_12171819_12172819
Length = 1001
Score = 1058 bits (547), Expect = 0.0
Identities = 586/601 (97%), Gaps = 5/601 (0%)
Strand = Plus / Plus
Query: 1 tcaagtaaatctacattaaaatattttcttaaagaactataactctgtcacataaaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaagtaaatctacattaaaatattttcttaaagaactataactctgtcacataaaactt 260
Query: 61 tttttaaaaattagctgaacacaggcatcatttttaagttcaaagccctctgatggttct 120
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ttttaaaaaattagctgaacacaggcatcatttttaagttcaaagccttctgatggttct 320
Query: 121 gtaatatccaagatccctactctgggtagagtaaaattatagtt----gatcagagtcac 176
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gtaatatccaagatccctactctgggtagagtaaaattatagttagttgatcagagtcac 380
Query: 177 tcagaggaccattacttgaagtagagttaacagtcattgctcagataaacgaatgggcca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagaggaccattacttgaagtagagttaacagtcattgctcagataaacgaatgggcca 440
Query: 237 tatgaagtagagaaactcaggtagtcattgctggacatcagtgattactgcctacagagt 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tatgaagtagagaaactcaggtagtcattgctggacatcagtgattactgcctacaaagt 500
Query: 297 aactgaattttccttagcttaatcaatttgttatttgttttttattacataccttcttta 356
||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||
Sbjct: 501 aactgaattttccttagcttaattaatttgttatttgttttttattagatattttcttta 560
Query: 357 tatacatttcaaatttcaaatgcttagcttaattcatttatcccgatagaaagtgagacc 416
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 tatacatttcaaatttcaaatgcttagcttaattcatttatcccaatagaaagtgagacc 620
Query: 417 gaagggaacccatctgacccagaggggtgattgatgtttcattggcatagaggggaagta 476
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 621 gaagggaacccatctgacccagaggggtgattgatgtttcattggtattgaggggaagta 680
Query: 477 agttttgcaggattttttttatccattaaaaacaaaacaatggcatatttcgaggtattg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttttgcaggattttttttatccattaaaaacaaaacaatggcatatttcgaggtattg 740
Query: 537 tttttctagtagaaaaaaaa-ttctatgtagcatttctatgtgttcacatctggcagtca 595
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttttctagtagaaaaaaaaattctatgtagcatttctatgtgttcacatctggcagtca 800
Query: 596 g 596
|
Sbjct: 801 g 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 1001
Length adjustment: 10
Effective length of query: 586
Effective length of database: 991
Effective search space: 580726
Effective search space used: 580726
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
