Query= MSMg01no124_m14.b1 MSMg01no124_m14.b1 CHROMAT_FILE:
MSMg01no124_m14.b1 PHD_FILE: MSMg01no124_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:21 2005
(414 letters)
>mm_chr10_82992277_82993090
Length = 814
Score = 559 bits (289), Expect = e-163
Identities = 304/309 (98%)
Strand = Plus / Minus
Query: 104 gggcgtggtagtgtgcacctgaagcctaagagctggggaagcagagacaggaggattcct 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gggcgtggtagtgtgcacctgaagcctaagagctggggaagcagagacaggaggattcct 755
Query: 164 ggagtcaactggttaccagcacagctgaatcagtcagctccaggtctggtgaaagacctt 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ggagtcaactggttaccagcacagctgaatcagtcagctccaggtctggtgaaagacctt 695
Query: 224 gtctcaaataataacatggagggtcatagaggaggacaccaggcagtgacacttggcctc 283
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 694 gtctcaaataataacatggagggtcatagaggaggacaccaggcagtgacacctggcctc 635
Query: 284 catgaacatacacacatatgcacctgcacttatatgtgcacacatgcaaaaacacgtatg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 catgaacatacacacatatgcacctgcacttatatgtgcacacatgcaaaaacacgtatg 575
Query: 344 gacacatatgtacaaatatcctatctcctacccactatgaagaactcccggtaatatctt 403
| |||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 574 ggcacatatgtaaaaatatcctatctcttacctactatgaagaactcccggtaatatctt 515
Query: 404 cccctttca 412
|||||||||
Sbjct: 514 cccctttca 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_m14.g1 MSMg01no124_m14.g1 CHROMAT_FILE:
MSMg01no124_m14.g1 PHD_FILE: MSMg01no124_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:21 2005
(335 letters)
>mm_chr10_82834194_82834927
Length = 734
Score = 580 bits (300), Expect = e-170
Identities = 326/338 (96%), Gaps = 7/338 (2%)
Strand = Plus / Plus
Query: 1 agatttaggagacaaggggatactaaaaaatgcctcagcaaggtttcacacaacatggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatttaggagacaaggggatactaaaaaatgcctcagcaaggtttcacacaacatggac 260
Query: 61 tgactcagttactcgtatccgttgttacgtcagagcagttgttggtcatagttatgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgactcagttactcgtatccgttgttacgtcagagcagttgttggtcatagttatgtgga 320
Query: 121 tgcggaactgctcggctgtgatccaagtcatcgtctaggaaatagctggcttccctggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcggaactgctcggctgtgatccaagtcatcgtctaggaaatagctggcttccctggcc 380
Query: 181 agactgagctgtggaaaaggctctggcctggctgaataatcattccttgatggatggcag 240
|||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| ||
Sbjct: 381 agactgagctatggaaaaggctctggcctggcagaataatcactccttgatggatgggag 440
Query: 241 gcttgggagctacatgaggtgacctgatcagacctcattgtttttta---aacaagtcca 297
|||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 441 gcttgggagctacatgaggtgacctgatcagacctcattggt----agcaaacaagtcca 496
Query: 298 agtttcttggtgtagttctaggtgaggttcacctgcac 335
||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agtttcttggtgtagttctaggtgaggttcacctgcac 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 734
Length adjustment: 9
Effective length of query: 326
Effective length of database: 725
Effective search space: 236350
Effective search space used: 236350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
