Query= MSMg01no125_c03.b1 MSMg01no125_c03.b1 CHROMAT_FILE:
MSMg01no125_c03.b1 PHD_FILE: MSMg01no125_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:04 2005
(314 letters)
>mm_chr10_89945845_89946558
Length = 714
Score = 600 bits (310), Expect = e-176
Identities = 310/310 (100%)
Strand = Plus / Plus
Query: 5 gaattcatgagcttaatgtgccatctacttgatggtctgtaaggatgagcattaaaataa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgagcttaatgtgccatctacttgatggtctgtaaggatgagcattaaaataa 264
Query: 65 ataaaagataactattaactgttcttccatgaattgcttaaaatgatacctctcaccact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaaagataactattaactgttcttccatgaattgcttaaaatgatacctctcaccact 324
Query: 125 ctgtgctttggtgatattcatttcaatcacaaagaaacatcgaagagctttgaatagcgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgtgctttggtgatattcatttcaatcacaaagaaacatcgaagagctttgaatagcgg 384
Query: 185 tgcaacaggagtgtacttccattatagagaacaatggagccccattggagaacatgaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcaacaggagtgtacttccattatagagaacaatggagccccattggagaacatgaaca 444
Query: 245 ggaggaagctcaggcttgcatcaaggagaatagttagggaactttcattgttaccaggct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggaggaagctcaggcttgcatcaaggagaatagttagggaactttcattgttaccaggct 504
Query: 305 tggcaggaca 314
||||||||||
Sbjct: 505 tggcaggaca 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_c03.g1 MSMg01no125_c03.g1 CHROMAT_FILE:
MSMg01no125_c03.g1 PHD_FILE: MSMg01no125_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:04 2005
(132 letters)
>mm_chr10_89976637_89977169
Length = 533
Score = 242 bits (125), Expect = 7e-69
Identities = 131/133 (98%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 1 acatatttttgttttc-ccattcctgtttaacatggagatggtctttatgctgtaaacct 59
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 333 acatatttttgttttcaccattcctgtttaacatggagatggtcattatgctgtaaacct 274
Query: 60 cgctgtaggagcttgagacacatctagtatcaaggtttaaagtaatatgcatgccttggt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cgctgtaggagcttgagacacatctagtatcaaggtttaaagtaatatgcatgccttggt 214
Query: 120 acctgctaccaat 132
|||||||||||||
Sbjct: 213 acctgctaccaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 132
Length of database: 533
Length adjustment: 8
Effective length of query: 124
Effective length of database: 525
Effective search space: 65100
Effective search space used: 65100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
