Query= MSMg01no125_o12.b1 MSMg01no125_o12.b1 CHROMAT_FILE:
MSMg01no125_o12.b1 PHD_FILE: MSMg01no125_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:05 2005
(524 letters)
>mm_chr10_73777343_73778267
Length = 925
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%), Gaps = 1/523 (0%)
Strand = Plus / Plus
Query: 3 ggaattcagttgttctgaaaatctaatttgagtttcgttttcctcccaccgaatcacttt 62
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 203 ggaattcagttgttctaaaaatctaatttgagtttagttttcctcccaccgaatcacttt 262
Query: 63 gttttcatggagcaa-taatacatgttttccagggttcgcagctggtagtaaaaactaat 121
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttttcatggagcaaataatacatgttttccagggttcgcagctggtagtaaaaactaat 322
Query: 122 gacacaatctcaatatggaatacaagtttcttgcattactatccaattgcgctgcttccc 181
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 323 gacacaatctcaatatggaatacaagcttcttgcattactatccaattgcgctgcttccc 382
Query: 182 tcatccctgtgccaccacccccaccccgccacgcacataaaaatatgtatgtatttgttg 241
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 383 tcatccctgtgccaccacccccacccctccacgcacataaaaatatgtatgtatttgttg 442
Query: 242 ggtgagaggaaatagattatacaatttgcatgttgccataccatttttgatatctctgga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggtgagaggaaatagattatacaatttgcatgttgccataccatttttgatatctctgga 502
Query: 302 cagcacttagtagttttaagaacaaaaagagtcaagcagagagaaggaaatcctgttcac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cagcacttagtagttttaagaacaaaaagagtcaagcagagagaaggaaatcctgttcac 562
Query: 362 aacaacgtatgtgtgcaaactgctcagtgtccacaggcctggcacagagcagtcctgcct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aacaacgtatgtgtgcaaactgctcagtgtccacaggcctggcacagagcagtcctgcct 622
Query: 422 tcagcaggccgtgaagtcaggtgggaactccatgtctgcagtgtttgtttctgtagtgag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcagcaggccgtgaagtcaggtgggaactccatgtctgcagtgtttgtttctgtagtgag 682
Query: 482 gttctgtttcctggtggggcaccgcatctgctttccttttcgg 524
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gttctgtttcctggtggggcaccgcatctgctttccttttcgg 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_o12.g1 MSMg01no125_o12.g1 CHROMAT_FILE:
MSMg01no125_o12.g1 PHD_FILE: MSMg01no125_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:05 2005
(591 letters)
>mm_chr10_73907055_73908045
Length = 991
Score = 1077 bits (557), Expect = 0.0
Identities = 581/589 (98%)
Strand = Plus / Minus
Query: 3 cttgaatatgagccatcgggttcggcctccttcgtccttggaacatggctatgaactaac 62
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 791 cttgaatatgagccatcgggttcggcctcctgagtccttggaacatggctatgaactaac 732
Query: 63 atcacagaatttctgtgagtggaacatactgagataaaaccctgaaagaaggctagatgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atcacagaatttctgtgagtggaacatactgagataaaaccctgaaagaaggctagatgt 672
Query: 123 gtttggcctactgctgagacacctgagtggtaggtcccctaggcaatctgctagcaattg 182
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 671 gtttggcctactgctgagacaccggagtggtaggtcccctaggtaatctgctagcaattg 612
Query: 183 atggcaagttaaaatgtatccatcattacattcaaattatttagagagaattatttgtgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 atggcaagttaaaatgtatccatcattacattcaaattatttagagagaattatttgtgt 552
Query: 243 cacacaacaaaatttttctacaagtatccaggtgatgacacacaggaggatatcacagct 302
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cgcacaacaaaatttttctacaagtatccaggtgatgacacacaggaggatatcacagct 492
Query: 303 acttggaaggcacgaactaccatgtggcacctcattatggtagtgtgagggtgacagcga 362
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 491 acttggaaggcatgaactaccatgtggcacctcattatggcagtgtgagggtgacagcga 432
Query: 363 actttgctccctctttgcttgtcctctgcagcaatttcagaggctgtgccctcctttctc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 actttgctccctctttgcttgtcctctgcagcaatttcagaggctgtgccctcctttctc 372
Query: 423 actcagagaaggagctgtgggagctgcagaagaggagggcatctgggcaccagccagaga 482
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 371 actcagagaaggagctgtgggagctgcagaagaggagggcatttgggcaccagccagaga 312
Query: 483 atctttaatgacattattagtagagatgccttctattatctagcaacctcaaactttata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atctttaatgacattattagtagagatgccttctattatctagcaacctcaaactttata 252
Query: 543 aaatagtagctggcttatgctgatcttgctcaagagctgtgatgattca 591
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aaatagtagctggcttatgctgatcttgctcaagagctgtgatgattca 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
