Query= MSMg01no126_e13.b1 MSMg01no126_e13.b1 CHROMAT_FILE:
MSMg01no126_e13.b1 PHD_FILE: MSMg01no126_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:36 2005
(280 letters)
>mm_chr10_109940412_109941091
Length = 680
Score = 503 bits (260), Expect = e-147
Identities = 272/276 (98%)
Strand = Plus / Plus
Query: 5 gaattctttgtttacctctgtgccccattttttaatgggggtatttgattttctggagtc 64
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatgtttagctctgtgccccattttttaatgggggtatttgattttctggagtc 264
Query: 65 taccttcttgagttctttatatatattagatattagttccctatctgatttaggattggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taccttcttgagttctttatatatattagatattagttccctatctgatttaggattggt 324
Query: 125 aaagatcctttcccagtctgttggtggccttttttctaggaacaatctatgtaattgttc 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 aaagatcctttcccagtctgttggtggccttttttctaggaaccatctatgtaattgttc 384
Query: 185 catataaacatacaagcaaagcaaaactatgtatatcacaattatgtttaaaatagtaaa 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catatagacatacaagcaaagcaaaactatgtatatcacaattatgtttaaaatagtaaa 444
Query: 245 aatacataatgatatacagatatggcactaatatgt 280
||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatacataatgatatacagatatggcactaatatgt 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no126_e13.g1 MSMg01no126_e13.g1 CHROMAT_FILE:
MSMg01no126_e13.g1 PHD_FILE: MSMg01no126_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:36 2005
(298 letters)
>mm_chr10_110112620_110113317
Length = 698
Score = 462 bits (239), Expect = e-134
Identities = 283/305 (92%), Gaps = 15/305 (4%)
Strand = Plus / Minus
Query: 1 tttggaaggtgg-----aaagtaacagaaaatgttatgatatctattgttgcataaaagg 55
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttggaaggtggaaaaaaaa--aacagaaaatgttatgatatctattgttgcataaaagg 328
Query: 56 tcagtgtgatatgagccaacaaatatttaatgatgttataaatagtatactgtgggtcag 115
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 327 tcagtgtgatatgagccaacaaatatttaatgatgttataaatagtatacggtgggtcag 268
Query: 116 gagttcaaaaagacacacatataaacctacacatcacatctgtgtgtgcatgtgcacaca 175
|||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 267 gagttcaaaaagacacacatataaacctacacatcacatctgtgagtgcacgcgcacaca 208
Query: 176 cacacacacacacactcacacac--acttattggagtggattggatatcatgactatgga 233
||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 207 cacacacacacacac------acttacttattggagtggattggatatcataactatgga 154
Query: 234 agttgactaggcaagtctgatatggttacatggttgtttgtctgcccaacaagaaggatg 293
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 153 agttgactaggcaagtctgatatggttgcatggttgtttgtctgcccaacaagaaggctg 94
Query: 294 ctatt 298
|||||
Sbjct: 93 ctatt 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|