Query= MSMg01no127_c18.b1 MSMg01no127_c18.b1 CHROMAT_FILE:
MSMg01no127_c18.b1 PHD_FILE: MSMg01no127_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:49 2005
(249 letters)
>mm_chr10_96897725_96898374
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 1 atgaatgaaatgaaa-aataatggaatgtatcctgatcattcgtcaggggaaccaaagag 59
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atgaatgaaatgaaactataatggaatgtatcctgatcattcgtcaggggaaccaaagag 391
Query: 60 acttgctgaataaataattcaatagttcatttctgatttctcattctagaggttgaaatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 acttgctgaataaataattcaatagttcatttctgatttctcattctagaggttgaaatg 331
Query: 120 acgagacttggaaaactgtattttcccgtcctcatccaaattacagagggaaggactcgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 acgagacttggaaaactgtattttcccgtcctcatccaaattacagagggaaggactcgt 271
Query: 180 gacaagaggcaaagatgtttctggagcatggcacatagactcatgtcttaaaagctggat 239
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 270 gacaagaggcaaagatatttctggagcatggcacatagacacatgtcttaaaagctggat 211
Query: 240 attctgccac 249
||||||||||
Sbjct: 210 attctgccac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 650
Length adjustment: 9
Effective length of query: 240
Effective length of database: 641
Effective search space: 153840
Effective search space used: 153840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_c18.g1 MSMg01no127_c18.g1 CHROMAT_FILE:
MSMg01no127_c18.g1 PHD_FILE: MSMg01no127_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:50 2005
(344 letters)
>mm_chr10_96736945_96737688
Length = 744
Score = 663 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus
Query: 1 attctgcatttgctttattttaaaaactttctgcattgattctttaacttgggttttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgcatttgctttattttaaaaactttctgcattgattctttaacttgggttttcct 260
Query: 61 cactgacagattgcttaatattcacttgcaaaaagcatgctttcaatttagttttaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactgacagattgcttaatattcacttgcaaaaagcatgctttcaatttagttttaatgt 320
Query: 121 ggaaggcttgggtatttaatcaatattaaatgaatattaaaaacatatttctctagaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaggcttgggtatttaatcaatattaaatgaatattaaaaacatatttctctagaata 380
Query: 181 aaaaatatgcggtacaaaactgaaggaaatagagtttttcctattaatcatttaagatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaatatgcggtacaaaactgaaggaaatagagtttttcctattaatcatttaagatgt 440
Query: 241 tcgataattatactgcttgctgggtattatagaacaataaaattcttcctgcgattttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgataattatactgcttgctgggtattatagaacaataaaattcttcctgcgattttct 500
Query: 301 gtgtacttcactgcaatggatggcctggaagtattcagtatgt 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtacttcactgcaatggatggcctggaagtattcagtatgt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
