Query= MSMg01no127_p21.b1 MSMg01no127_p21.b1 CHROMAT_FILE:
MSMg01no127_p21.b1 PHD_FILE: MSMg01no127_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:56 2005
(249 letters)
>mm_chr10_41692072_41692720
Length = 649
Score = 414 bits (214), Expect = e-120
Identities = 241/250 (96%), Gaps = 1/250 (0%)
Strand = Plus / Plus
Query: 1 ggaattcactctgtattccag-ctggccttgaacacatagagacccctcttgcttctgcc 59
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaattcactctgtagaccaggctggccttgaacacatagagacccctcttgcttctgcc 259
Query: 60 tctcaagtgctgggattacgccactacctcctggctatgttcctttcaaaatgactgtca 119
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctcacgtgctgggattaagccactacctcctggctatgttcctttcaaaatgactgtca 319
Query: 120 accaggggaagagacagtacaagccaccattaccaaagaggagacttctaaacaaatgct 179
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 320 accagggggagagacagtacaagccaccattaccaaagaggagacttttaaacaaatgct 379
Query: 180 gcttaggaaagagggaggctagaatattttgtttacagctgtgatcctgaggaaagtgat 239
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 380 gcttaggaaagagggaggctagaatattttgtttacagttgtgatcctgaagaaagtgat 439
Query: 240 ttttgagagt 249
||||||||||
Sbjct: 440 ttttgagagt 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_p21.g1 MSMg01no127_p21.g1 CHROMAT_FILE:
MSMg01no127_p21.g1 PHD_FILE: MSMg01no127_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:56 2005
(292 letters)
>mm_chr10_41846776_41847466
Length = 691
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 aggcagttcaccctcgccctgactctataaatgtaatcaaactcttccatctacatcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aggcagttcaccctcgccctgactctataaatgtaatcaaactcttccatctacatcagg 432
Query: 61 ttgaccctacctttcatgtttagctcaagctcttcaagtcagcccctccctaattaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttgaccctacctttcatgtttagctcaagctcttcaagtcagcccctccctaattaatgc 372
Query: 121 acaagtagggtgacctgttgagcttagtcctgacactgcgggggcagctgggaaaagtgc 180
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 371 acaagtagggtgacctgttgagcttagtcctgacactgtgggg-cagctgggaaaagtgc 313
Query: 181 ctcaaatgccgctctgttggctgagccctccatgggagacttctagttggttgctgcgtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 312 ctcaaatgccgctctgttggctgagccctccatgggagacttctagttggttgctgtgtg 253
Query: 241 catatcccataagccaccaagataaatgacctactaatacagtaaataaatc 292
||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 252 catctcccataagccaccaagataaatgacctagtaatacagtaaataaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
