Query= MSMg01no128_d20.b1 MSMg01no128_d20.b1 CHROMAT_FILE:
MSMg01no128_d20.b1 PHD_FILE: MSMg01no128_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:16 2005
(500 letters)
>mm_chr10_62272251_62273150
Length = 900
Score = 940 bits (486), Expect = 0.0
Identities = 492/494 (99%)
Strand = Plus / Plus
Query: 7 gaattctaggatagcctgctctgctacatgagttccaggacagccggaactacatagaga 66
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctaggatagcctggtctgctacatgagttccaggacagccggaactacatagaga 266
Query: 67 tccagtctcataaaaccaaaacccaccaaaaatggttttaagagggcaggtgatgtctaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tccagtctcataaaaccaaaacccaccaaaaatggttttaagagggcaggtgatgtctaa 326
Query: 127 ttctaaagcaggcaggaatgaattgtagcatcaccagggctactgtggaagtcatataac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttctaaagcaggcaggaatgaattgtagcatcaccagggctactgtggaagtcatataac 386
Query: 187 aatgtatccaatgttcacagcgagaacagtcttagtcagagctccacaaacgaggtcaga 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aatgtatccaatgttcacagcgagaacagtcttagtcagagctccacaaacgaggtcaga 446
Query: 247 ggaacgcaatctaattaaaacagtagaggtgtagaaagactgtcagataagtgactgtca 306
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 447 ggaacgcaatctaattaaaacagtagaggtgtagaaagattgtcagataagtgactgtca 506
Query: 307 tctcaaaccaatgtattttactttttgtctttttgagacagggtttctctgtgtagccct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tctcaaaccaatgtattttactttttgtctttttgagacagggtttctctgtgtagccct 566
Query: 367 ggctgtcctcgagctcagaaatccacctgcctctgcctcccaagtactgggattaaaggc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggctgtcctcgagctcagaaatccacctgcctctgcctcccaagtactgggattaaaggc 626
Query: 427 atgctctaccactgtccggttgtattttgtttttaagaaagtccattcttaaagccgtgt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 atgctctaccactgtccggttgtattttgtttttaagaaagtccattcttaaagccgtgt 686
Query: 487 atagccagcagatg 500
||||||||||||||
Sbjct: 687 atagccagcagatg 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_d20.g1 MSMg01no128_d20.g1 CHROMAT_FILE:
MSMg01no128_d20.g1 PHD_FILE: MSMg01no128_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:16 2005
(353 letters)
>mm_chr10_62352989_62353742
Length = 754
Score = 559 bits (289), Expect = e-163
Identities = 310/317 (97%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 34 tcaaaaactaaaaaaaaaatacaaaagccccaaacagctgggcagtggtggcacacacct 93
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 754 tcaaaaactaaaataaaaatacaaaagccccaaacagccgggcagtggtggcacacacct 695
Query: 94 ttaatccctgcacttgagaggcagaggcaggcagatttctgagttcaagggcagcctgat 153
||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| |
Sbjct: 694 ttaattcctgcacttgagaggtagaggcaggcagatttttgagttcaagggcagcctggt 635
Query: 154 ctgcagaatgagttccaggacaggcagggctacacagagaaactctgtcttgaaacaaaa 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ctgcagaatgagttccaggacaggcagggctacacagagaaactctgtcttgaaacaaaa 575
Query: 214 caaaacaaaataaaacaaaataaatgaagccccaaacaacaacaccaccc-aaaaaaaaa 272
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 574 caaaacaaaataaaacaaaataaatgaagccccaaacaacaacaccacccaaaaaaaaaa 515
Query: 273 aaatcttatggattgggctagggatagagctcatataccaaataaagcagacaaataagg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aaatcttatggattgggctagggatagagctcatataccaaataaagcagacaaataagg 455
Query: 333 tctgtagtaaattttga 349
|||||||||||||||||
Sbjct: 454 tctgtagtaaattttga 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 754
Length adjustment: 9
Effective length of query: 344
Effective length of database: 745
Effective search space: 256280
Effective search space used: 256280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
