Query= MSMg01no129_c02.b1 MSMg01no129_c02.b1 CHROMAT_FILE:
MSMg01no129_c02.b1 PHD_FILE: MSMg01no129_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:27 2005
(474 letters)
>mm_chr10_75455548_75456422
Length = 875
Score = 830 bits (429), Expect = 0.0
Identities = 463/481 (96%), Gaps = 11/481 (2%)
Strand = Plus / Plus
Query: 5 gaattccataatgtattccatccctgtgtcgactgacttttgctagtttgatctgtctct 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaattccataatgtatttcatccctgtgtcgactgacttttgctagtttgatctgtctct 254
Query: 65 caggcaacgagtcttgcttattggttaggtaagggaacagtttctctggcaagtattgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 caggcaacgagtcttgcttattggttaggtaagggaacagtttctctggcaagtattgct 314
Query: 125 agcagtccagatagcatgggtgaattctagcactgcatcctgctaagtgtctctgtcaag 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 315 agcagtccagatagcatgggtgaattctagcactgcatgctgctaagtgtctctgtcaag 374
Query: 185 gtcaaagaaaatggagaacagctcttatgttcagtcacatgagcagcagccatctctcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtcaaagaaaatggagaacagctcttatgttcagtcacatgagcagcagccatctctcac 434
Query: 245 tctacctcacccttctgtctgtctgccccgagacatgcttctttctgtgtgcccccccca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tctacctcacccttctgtctgtctgccccgagacatgcttctttctgtgtgcccccccca 494
Query: 305 c-----------tttaatagagaggagattcaacaactcaacaactcactctttgcgtct 353
| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 495 cccccaccccactttaatagagaggagattcaacaactcaacaactcactctttgcatct 554
Query: 354 gctcttcaataatcaagcagcgccatgcgatctcatgaatatttataactagaaaattga 413
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 555 gctcttcagtaatcaagcagtgccatgcgatctcatgaatatttataactagaaaatcga 614
Query: 414 cctctctgctctccatgacttgaggagtctaatgtaccatgttgaactatgcccatcttg 473
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 615 cctctctgctctccatgacttgaggagtctaacgtaccatgttgaactatgcccatcttg 674
Query: 474 g 474
|
Sbjct: 675 g 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 875
Length adjustment: 10
Effective length of query: 464
Effective length of database: 865
Effective search space: 401360
Effective search space used: 401360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_c02.g1 MSMg01no129_c02.g1 CHROMAT_FILE:
MSMg01no129_c02.g1 PHD_FILE: MSMg01no129_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:27 2005
(234 letters)
>mm_chr10_75603700_75604333
Length = 634
Score = 429 bits (222), Expect = e-125
Identities = 231/234 (98%)
Strand = Plus / Minus
Query: 1 caataggactttaaaaatagaagagaagaccaccaaccacctcatgtaaacatgcagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 caataggactttaaaaatagaagagaagaccaccaaccacctcatgtaaacatgcagcaa 375
Query: 61 ggagggaacggttaagacaacaggaacaggttcttaaaaacactcagagaagaaagattc 120
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 374 ggagggaacagttaagacaacaggaacaggttcttaaaaccactcagagaagaaagattc 315
Query: 121 gaactacagtattttgaaatagcagttcacatacgtcagtagcaaacattgtaaaacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaactacagtattttgaaatagcagttcacatacgtcagtagcaaacattgtaaaacttt 255
Query: 181 taatactcatgttaggaagttggtatgcaaacagaactactaagtattgttgca 234
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 254 taatactcatgttaggaagttggcatgcaaacagaactactaagtattgttgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
