Query= MSMg01no129_j10.b1 MSMg01no129_j10.b1 CHROMAT_FILE:
MSMg01no129_j10.b1 PHD_FILE: MSMg01no129_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:03 2005
(286 letters)
>mm_chr10_63977930_63978615
Length = 686
Score = 487 bits (252), Expect = e-142
Identities = 278/288 (96%), Gaps = 4/288 (1%)
Strand = Plus / Plus
Query: 1 caaaactatgccactcagtctgtcagtaacaaataaaaactcctctttgcaaatgcgttt 60
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 caaaactgtgccactcagtctgtcagtaacaaataaaaactcctttttgcaaatgcgttt 260
Query: 61 tcaaccttcttcccctttatgtaatcattgttttaaatatggttctctctgatttctcaa 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaccttcttcccctttatataatcattgttttaaatatggttctctctgatttctcaa 320
Query: 121 gtatttcccttacttcatcccctattcctcttctattggtcttataaaacaaaatgttga 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gtatttcccttacttcatcccctattcctcttctattggccttataaaacaaaatgttga 380
Query: 181 tcttttattctaattgtatt--attaaccagtagctgagttcttcattgatgtgagctta 238
||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttttattctaa--gtataccattaaccagtagctgagttcttcattgatgtgagctta 438
Query: 239 taactttagacataaccttgtatatgattttagaagaaccttgggcat 286
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaactttagacataaccttgtatatgattttagaagaaccttgggcat 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no129_j10.g1 MSMg01no129_j10.g1 CHROMAT_FILE:
MSMg01no129_j10.g1 PHD_FILE: MSMg01no129_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:03 2005
(236 letters)
>mm_chr10_64094830_64095465
Length = 636
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%)
Strand = Plus / Minus
Query: 1 ctttgaaacatggaaaagggcctaaagtttgaaaatattggtctccattcatgataaaag 60
||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||
Sbjct: 436 ctttgaaacatggaaaaggacctaaagtttgaaaatattggtccccattcgtgataaaag 377
Query: 61 acacacacaaaagccataaaacaacaaggaataaagaattgttctcctagaggaagaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 acacacacaaaagccataaaacaacaaggaataaagaattgttctcctagaggaagaata 317
Query: 121 cccccttgaattttttaatagcggcagtacagatttcttctttcaagtcaaccatcatgt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cccccttgaattttttaatagtggcagtacagatttcttctttcaagtcaaccatcatgt 257
Query: 181 tatatcaattttcctggttttattaacacatgttcctatattcaagcttcaatatg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tatatcaattttcctggttttattaacacatgttcctatattcaagcttcaatatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
