Query= MSMg01no129_l22.b1 MSMg01no129_l22.b1 CHROMAT_FILE:
MSMg01no129_l22.b1 PHD_FILE: MSMg01no129_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:16 2005
(459 letters)
>mm_chr10_13725102_13725959
Length = 858
Score = 849 bits (439), Expect = 0.0
Identities = 454/459 (98%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 1 acatctgtagggtatagcccaggggtggggttactacttcaagaactcctgtatcaattc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 acatctgtagggtatagcccaggggtggggttactgcttcaagaactcctgtatcaattc 260
Query: 61 tagtatctccttccacttgcctttttaaaaggggagagcagctcccctccttttggcaat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tagtatctccttccacttgcctttttaaaaggggagagcagcttccctccttttggcaat 320
Query: 121 gcatgtaggatccagttgcccctctctggcataatacttctggccatctactgattacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatgtaggatccagttgcccctctctggcataatacttctggccatctactgattacat 380
Query: 181 ataatgtgtggtctttgagacttttcatttgtcttgtgctttatgaagttgagccctttt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 381 ataatgtgtggtctttgagacttt-catttgtcttgtgctttatgaagttgagccctctt 439
Query: 241 cacacttattttactgttggctgctctgttttataatgagcccactgaagcatttgtcac 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 cacacttattttactgttggctgctctgttttataatgagcccactgaagtatttgtcac 499
Query: 301 ttttcctattggtcttccatttaaaaaagcaccactgttaaatgagagaagtattatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttttcctattggtcttccatttaaaaaagcaccactgttaaatgagagaagtattatgga 559
Query: 361 agacctgccaagcactggaattatggtggcacagcagctatgccttatgccctgttgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agacctgccaagcactggaattatggtggcacagcagctatgccttatgccctgttgatt 619
Query: 421 gggattttgaatgattggctatgcataggagagttaaga 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggattttgaatgattggctatgcataggagagttaaga 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 858
Length adjustment: 10
Effective length of query: 449
Effective length of database: 848
Effective search space: 380752
Effective search space used: 380752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_l22.g1 MSMg01no129_l22.g1 CHROMAT_FILE:
MSMg01no129_l22.g1 PHD_FILE: MSMg01no129_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:16 2005
(293 letters)
>mm_chr10_13828638_13829330
Length = 693
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Minus
Query: 1 actcatgagtgggtatccaaaacatgcacaaaaccctttcttgtttgttatcccaagagg 60
||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 490 actcatgagtgggtatccaaaacatgcacaaaaacctttcttgtttggtatccaaagagg 431
Query: 61 agccttctaaaccctcgggcatgagcatgaaagtgcaaggtgctttggacctgccccgct 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agccttctaaaccctcggacatgagcatgaaagtgcaaggtgctttggacctgccccgct 371
Query: 121 gatctctcgctagcccaagaattttatttttacttcaatctagacatgacattttcgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gatctctcgctagcccaagaattttatttttacttcaatctagacatgacattttcgagc 311
Query: 181 ctacttagtggccctctttggtttagaaagctaacatataaacttgtgtcctctctgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctacttagtggccctctttggtttagaaagctaacatataaacttgtgtcctctctgaag 251
Query: 241 gaagtatctagtttgtttgcttgctttttttctaggcaaatttttggtca 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaagtatctagtttgtttgcttgctttttttctaggcaaatttttggtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
