Query= MSMg01no132_k08.b1 MSMg01no132_k08.b1 CHROMAT_FILE:
MSMg01no132_k08.b1 PHD_FILE: MSMg01no132_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:13 2005
(645 letters)
>mm_chr10_31691095_31692138
Length = 1044
Score = 1203 bits (622), Expect = 0.0
Identities = 637/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 4 gaattctggttcctataacattcttccctcttttgttgaatagaaatttccattctgttc 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctggttcctaaaacattcttccctcttttgttgaatagaaatttccattctgttc 263
Query: 64 cacacgagctaatgcattgaaaattttgtatcttaaaaaaaaatgaggaatagaactgtg 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 cacacgagctaatgcattgaaaattttgtatcttaaaaaaaa-tgaggaatagaactgtg 322
Query: 124 ttttggtattaacaaattttatgaacacaagacttaagaaatatagagtagatgctgtta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttttggtattaacaaattttatgaacacaagacttaagaaatatagagtagatgctgtta 382
Query: 184 tgatggactggctacttgaaggctacaaattctccatatccccctgaatggatgggtgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgatggactggctacttgaaggctacaaattctccatatccccctgaatggatgggtgtt 442
Query: 244 tttagagaagcacaagcatacagcctaaaatcttctgatggggaaagcagaccaatccaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tttagagaagcacaagcatacagcctaaaatcttctgatggggaaagcagaccaatccaa 502
Query: 304 ggagggttctgatgcactgaggtgaatttttggcagtgagcaggccagcagctcaacgaa 363
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggagggttctaatgcactgaggtgaatttttggcagtgagcaggccagcagctcaacgaa 562
Query: 364 ggtgagaatttggtgaaagagtggtctctctcctcttttcttttgaggcactctgccatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggtgagaatttggtgaaagagtggtctctctcctcttttcttttgaggcactctgccatt 622
Query: 424 aatctcgtcatggcttttggacagttactccataccttactgagatgtggagataggtat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aatctcgtcatggcttttggacagttactccataccttactgagatgtggagataggtat 682
Query: 484 cctcgtcccactataaaaattatctgatccctgagattgatatttgaataagatagctgg 543
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cctcgtccgactataaaaattatctgatccctgagattgatatttgaataagatagctgg 742
Query: 544 ccagtcatcagttcatatagaacaatcctaaatctatacacatctgactgaaagtcacgt 603
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 743 ccagtcatcagttcatatagaacaatcccaaatctatacacatctgactgaaagtcacgt 802
Query: 604 gggtttttatcttgcattctgattacttctggtgccatccac 645
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gggtttttatcttgcattctgattacttctggtgccatccac 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space: 656590
Effective search space used: 656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_k08.g1 MSMg01no132_k08.g1 CHROMAT_FILE:
MSMg01no132_k08.g1 PHD_FILE: MSMg01no132_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:13 2005
(626 letters)
>mm_chr10_31826895_31827921
Length = 1027
Score = 1189 bits (615), Expect = 0.0
Identities = 624/627 (99%), Gaps = 1/627 (0%)
Strand = Plus / Minus
Query: 1 ttaaaagaaaggaatatttttagacaaaaacaaattatagaaccagtccacttacaaggt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ttaaaagaaagggatatttttagacaaaaacaaattatagaaccagtccacttacaaggt 768
Query: 61 gagaagagacgctcaatacacataggaaatcacacaacccccactgaggaagggaagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gagaagagacgctcaatacacataggaaatcacacaacccccactgaggaagggaagttg 708
Query: 121 gacccaatcaggaaataaaagcagtttgtgccccgaatctgatgtaaatggt-aaaaaaa 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 707 gacccaatcaggaaataaaagcagtttgtgccccgaatctgatgtaaatggtaaaaaaaa 648
Query: 180 tgatataaagacacagatagaatacaacccaggaatatgaagccatagtagacaaggaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tgatataaagacacagatagaatacaacccaggaatatgaagccatagtagacaaggaac 588
Query: 240 cgaatcaaccacaagttattggagaaatgtggcaggaaagttactgggaagactacggtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cgaatcaaccacaagttattggagaaatgtggcaggaaagttactgggaagactacggtt 528
Query: 300 gccaaggagtagtcagggccctgatagtggatggatggaaacaatttaaccattggtatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gccaaggagtagtcagggccctgatagtggatggatggaaacaatttaaccattggtatt 468
Query: 360 aggctttcaaaatcataaaagtagcacataaattttattttctctccagagagctaggta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aggctttcaaaatcataaaagtagcacataaattttattttctctccagagagctaggta 408
Query: 420 tagaaactatgattcagaagcacatatttaagaatttgaaatcataactttatttactac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tagaaactatgattcagaagcacatatttaagaatttgaaatcataactttatttactac 348
Query: 480 aacacacacaaatgttactgcagctaagtaactcatattttctgagtgagcataaacatc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aacacacacaaatgttactgcagctaagtaactcatattttctgagtgagcataaacatc 288
Query: 540 cttgctgactttgaaagctgagtgttagtttccagatctgaattaaattaaaaacagttt 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cttgctgactttgaaagctgagtgttagtttccagatctgaattaaattaaaaacagtta 228
Query: 600 cagtgttaaacagttaataagtctata 626
|||||||||||||||||||||||||||
Sbjct: 227 cagtgttaaacagttaataagtctata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
