Query= MSMg01no135_i06.b1 MSMg01no135_i06.b1 CHROMAT_FILE:
MSMg01no135_i06.b1 PHD_FILE: MSMg01no135_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:40 2005
(274 letters)
>mm_chr10_32856592_32857263
Length = 672
Score = 441 bits (228), Expect = e-128
Identities = 262/276 (94%), Gaps = 6/276 (2%)
Strand = Plus / Plus
Query: 1 acttgagccttgattaatttatatgtgcaaaatttggcagtgtgaaggtaaaaataaatt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 acttgagccttgattaatttatatgtgcaaaattttgcagtgtgaaggtaaaaataaatt 260
Query: 61 aaagagggcaatgaaattagtaaattagtgttcattttaccattttcatcagtttgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 261 aaagagggcaatgaaattagtaaattagtgttcattttaccattttcattggttttaaaa 320
Query: 121 ttctgccatagttttcttgtcattaagtacaaaaagtacattaagattcagaacttccat 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ttctgccatagttttcttgtcattaagtacaaaaagtacattaagattcataacttccat 380
Query: 181 caagtctctaaaaaaaaaaaac--atgataataaaaaacacgatattactatttaaactg 238
||||||||||||||||| | |||||| ||||||||| |||||||||||||||||||
Sbjct: 381 caagtctctaaaaaaaa----cccatgatattaaaaaacatgatattactatttaaactg 436
Query: 239 tgaacttgcttactttcttgactttgcattttctat 274
||||||||| ||||||||||||||||||||||||||
Sbjct: 437 tgaacttgcatactttcttgactttgcattttctat 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 672
Length adjustment: 9
Effective length of query: 265
Effective length of database: 663
Effective search space: 175695
Effective search space used: 175695
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no135_i06.g1 MSMg01no135_i06.g1 CHROMAT_FILE:
MSMg01no135_i06.g1 PHD_FILE: MSMg01no135_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:40 2005
(218 letters)
>mm_chr10_32947252_32947869
Length = 618
Score = 398 bits (206), Expect = e-115
Identities = 215/218 (98%)
Strand = Plus / Minus
Query: 1 agaagtaaaggagttgttctgtttgtttgtttgtttttagatacaataagagatgcttca 60
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 418 agaagtaaaggagttgttttgtttgtttgtttgtttttagaaacaataagagatgcttca 359
Query: 61 ggaagtcaaatgcatgacactgaaaagaacaaagtaagatgagagttgatagcctagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggaagtcaaatgcatgacactgaaaagaacaaagtaagatgagagttgatagcctagagc 299
Query: 121 ggaatgtcacacattcatgcagtaaatacttagtgcttattattgaccaataacttcaca 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggaaggtcacacattcatgcagtaaatacttagtgcttattattgaccaataacttcaca 239
Query: 181 aaaacaaaactatagcatacagacaaattcatggtttg 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaaacaaaactatagcatacagacaaattcatggtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
