Query= MSMg01no136_b23.b1 MSMg01no136_b23.b1 CHROMAT_FILE:
MSMg01no136_b23.b1 PHD_FILE: MSMg01no136_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:24 2005
(590 letters)
>mm_chr10_38756502_38757491
Length = 990
Score = 915 bits (473), Expect = 0.0
Identities = 511/531 (96%), Gaps = 12/531 (2%)
Strand = Plus / Minus
Query: 60 tttctggagtccatcttcttgagctctttatatatatatatatatatattggatattagt 119
||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 990 tttctggagtccatcttcttgagttc------------tatatatatattggatattagt 943
Query: 120 tccctatcggatttaggattgttaaagatcctttcccaatctgttgatggtctttttgtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tccctatcggatttaggattgttaaagatcctttcccaatctgttgatggtctttttgtc 883
Query: 180 ttattgacagtgtcttttaccttacagaagctttgcaattttttgaggtcccattcgtcg 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 882 ttattgacagtgtcttttaccttacagaagctttgcaattttttgaggtctcatttgtcg 823
Query: 240 attctcgatcttacagcacaagccattgcagtcacatgacttctaattggtcacatgact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 attctcgatcttacagcacaagccattgcagtcacatgacttctaattggtcacatgact 763
Query: 300 tctatttggtcatatgaattctaattggtcatgtgacccacttttgtcctacctgtcatc 359
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tctatttggtcatatgaatcctaattggtcatgtgacccacttttgtcctacctgtcatc 703
Query: 360 cttgcttctctcctcttacatctccccagtctcagtccatcacactcctttacaagtgaa 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 702 cttgcttctctcctcttacatctccccagtctcagtccatcacactcctttagaagtgaa 643
Query: 420 ggcaaggaagaaaccaatgtctcttttctcatctcttgtggcagtctcccattgcacccc 479
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 642 ggcaaggaagaaaccaatctctcttttctcatctcctgtggcagtctcccattgcacccc 583
Query: 480 accttcacactcttcctcgaccaagtctatcctctctacagaagaagaaatgcttctgaa 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 582 accttcacactcttcctcgaccaagactatcctctctacagaagaagaaatgcttctgaa 523
Query: 540 atgcaaatctaatcagctattttgctgtaaatacttcaatgacttcaatgt 590
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 atgcaaatctaatcagctattttgctgtaaatacttcaatgacttcaatgt 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_b23.g1 MSMg01no136_b23.g1 CHROMAT_FILE:
MSMg01no136_b23.g1 PHD_FILE: MSMg01no136_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:24 2005
(632 letters)
>mm_chr10_38602870_38603901
Length = 1032
Score = 1160 bits (600), Expect = 0.0
Identities = 624/632 (98%)
Strand = Plus / Plus
Query: 1 agtcattcactgattgaattactgtgatagtaggtatgcaggtatgccaataaaatggtt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 agtcattcactgattgaattactgtgatagtaggtatgcaggtatgtcaataaaatggtt 260
Query: 61 tgggataacttttagtcctacaaagcaaatctaagaaggtctgtgtcctatgccttcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggataacttttagtcctacaaagcaaatctaagaaggtctgtgtcctatgccttcaaa 320
Query: 121 gacgggaagtctgtgaatttttaatatcaactctcaagaaatcagtgtgtcttcccctgg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacgggaagtctctgaatttttaatatcaactctcaagaaatcagtgtgtcttcccctgg 380
Query: 181 caagaatagttgtatagcactattcctggggagatatgaataaatgtctactcacctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagaatagttgtatagcactattcctggggagatatgaataaatgtctactcacctcaa 440
Query: 241 acagggaaactgaactacagataccaccacagaccagtttggtgaatcaatgagcattaa 300
|||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||
Sbjct: 441 acagggaaactgaactacagataccaccacagtccagtttggtgaatcaattagtattaa 500
Query: 301 tggggttacttacaggaatatgggtgagcggtaatttacagaagcagaaatgactcaaag 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 tggggttacttacaggaatatgggtgagcggtagtttacagaagcagaaatgactcaaag 560
Query: 361 gcagatgcatcaccaaagcccagcccagcacaggtgacagctcacaacagctgggaacct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagatgcatcaccaaagcccagcccagcacaggtgacagctcacaacagctgggaacct 620
Query: 421 ggaacacactatacagcctgcaggcatctcaagaggttggggaatgtcctttccaagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaacacactatacagcctgcaggcatctcaagaggttggggaatgtcctttccaagtga 680
Query: 481 ctcagttggtctaaacctcttctagacatctgggcttctcaggagtctactttgcagttt 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcagttggtctaaacctcttccagacatctgggcttctcaggagtctactttgcagttt 740
Query: 541 gcctcctttgaaagtgacttgtaataatcttttctgtttgtgcactctctggaaaagatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcctcctttgaaagtgacttgtaataatcttttctgtttgtgcactctctggaaaagatg 800
Query: 601 gccttaaagaccatggtcattttcagggactt 632
||||||||||||||||||||||||||||||||
Sbjct: 801 gccttaaagaccatggtcattttcagggactt 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
