NNTTTCATCTATAAXXXXXXXXXXXXXXXXXXXXXCTATTCCAAGAGGAG
CCGCGGAATTCCAACATTCACAACGAAGACAATACAGGCGGAGCCCCTGG
AGCAAGCCCTGCCCCTTCCCAGTAAGACAAAAAACACAGCAAAACAAAAA
CAACCACAAAATAAAAGGGCACTATCACAACTCAGGCAGGCACTTGATAA
GAGAGACTCTCCACCCTGTAGCTAATCCTGTGCCCACAGTTAAACATTAA
CAAGAACATCTATTTATTACACATTGATTTTTATCTCAGAGCTAAGAGAG
CGAAATGCAATCTGATTGCTGGGCTCATGCAGCCTCCAACATGCGCGACC
GCGGCGCTGTGTTTCCCAAGTCTCCCCTCTTCCCACACAGACACTCCTGT
TCACATTGTTGCCAGCTACACCACCGCCTCCCTACTTTGCTCCTGCTAAA
GAAAACCTTATGGATTCGTTTCTATCATAGACAGAAAAAATACTGCAAGA
GATGTCGAACTGCTTTTCTGATGCTGGGATTTTTGTTGTTGTTGTTGTTG
TTTGTTTGTTTTTGAAATTCTTCTCGTCACCCCTATTTTCTTATTTCTTT
AACTCACTTCTAATATCTATTCCTTTCCATTACTACTTAACACTTTTTTT
AACGCTTCTCTATTATCCAAAAATTTTTTATTACGATTACTCAATAATTC
CTATCCCTTCCCTATCTCTTATTTTTC

NNNNCCGATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTGTGTAGTGCAGGCTGGTCTGG
AACTAGGCAATCCTGCTGAGTCACCTTCCAAAGTGCTGAGACTGGTCCTG
AGCCACTGCTGTAGTCTGTAGGCCTCTTAGTTGCTAATTAAGGAATTGTT
AGGGGCTGGAGAGATGATGGATCCTGAGTTCAAATCCCAGAAACCTCATG
GTGGCCCACAACCATCCCTAATGCAATCTGATGCCTTCTTCTGGGGTGTC
TGAAGACAGCTACAGCATACTTACATATCAAATAAATCTTTAAAAAAAAT
ACCTCAAGACAAACATTTAACAAGAAATGGAAAACCAGGTGCAGCGGTGC
ACATCTTTAATCCCAGCACCCTGGAGGCAGAGGCAGGTGAATTACTGTAG
GCTAGCCTGGTCTACATAGTGAATTCTAGGACAGCCAGAGCTACATAGTG
GGAACCCGTCTTGAATAGAAGGGGAAGGGGAAGGGGAAGGGGAGAAGTTT
TTTTTTTTTTTTTTNTTTATTTTTTANTATTTTTTTTTTTATTATATATA
TAATTTTTATTTAATAAAATTTTAAATATCATTTTTCTTTTAATTTTTTT
TGGAGGATCTTTTAGTATAATTATATTTTTATAATATTTATCATTTATTA
TTGTCCTTATTAGCCCTCTTCTTTAACAG

Query= MSMg01no136_h21.b1 MSMg01no136_h21.b1 CHROMAT_FILE:
MSMg01no136_h21.b1 PHD_FILE: MSMg01no136_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:53 2005
         (486 letters)



>mm_chr10_70830703_70831589
          Length = 887

 Score =  839 bits (434), Expect = 0.0
 Identities = 465/478 (97%), Gaps = 6/478 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatacaggcggagcccctggagcaagccctgccccttcccagtaagacaaaaaacacagc 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 653 aatacaggcggagcccctggagcaagccctgccccttcccagtaaaacaaaaaacacagc 594

                                                                       
Query: 61  aaaacaaaaacaaccacaaaataaaagggcactatcacaactcaggcaggcacttgataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aaaacaaaaacaaccacaaaataaaagggcactatcacaactcaggcaggcacttgataa 534

                                                                       
Query: 121 gagagactctccaccctgtagctaatcctgtgcccacagttaaacattaacaagaacatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gagagactctccaccctgtagctaatcctgtgcccacagttaaacattaacaagaacatc 474

                                                                       
Query: 181 tatttattacacattgatttttatctcagagctaagagagcgaaatgcaatctgattgct 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 473 tatttattacacattgatttttatctcagagctaagacagcgaaatgcaatctgattgct 414

                                                                       
Query: 241 gggctcatgcagcctccaacatgcgcgaccgcggcgctgtgtttcccaagtctcccctct 300
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gggctcaggcagcctccaacatgcgcgaccgcggcgctgtgtttcccaagtctcccctct 354

                                                                       
Query: 301 tcccacacagacactcctgttcacattgttgccagctacaccaccgcctccctactttgc 360
           ||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||
Sbjct: 353 tcccacacagacactcctgttcacattgttgccagctacactagtgtctccctactttgc 294

                                                                       
Query: 361 tcctgctaaagaaaaccttatggattcgtttctatcatagacag-aaaaaatactgcaag 419
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 293 tcctgctaaagaaaaccttatggattcgtttctatcatagacagaaaaaaatactgcaag 234

                                                                     
Query: 420 agatgtcgaactgcttttctgatgctgggatttttgttgttgttgttgttgtttgttt 477
           |||||||||||||||||||||||||||||||||||||||||||     ||||||||||
Sbjct: 233 agatgtcgaactgcttttctgatgctgggatttttgttgttgt-----ttgtttgttt 181


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 887
Length adjustment: 10
Effective length of query: 476
Effective length of database: 877
Effective search space:   417452
Effective search space used:   417452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)