Query= MSMg01no136_i18.b1 MSMg01no136_i18.b1 CHROMAT_FILE:
MSMg01no136_i18.b1 PHD_FILE: MSMg01no136_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:58 2005
(349 letters)
>mm_chr10_6392121_6392869
Length = 749
Score = 601 bits (311), Expect = e-176
Identities = 338/347 (97%)
Strand = Plus / Minus
Query: 1 tgagttccagtccagccaagactacacattgaagccctgtcccaaaacaaaagccacata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 602 tgagttccagtccagccaagactacacattgaagccctgtcccaaaacaaaagcaacata 543
Query: 61 aaataacaaaaacaaaaaggacctacttcaagatgtctataattcagcttcaacttgtga 120
||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 542 aaaaaacgaaaacaaaaaggacctacttcaagatgtctagaattcagcttcaacttgtga 483
Query: 121 ggtgatttcagtggctctgcaagggactcctgtttattttccagatcctgttggttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggtgatttcagtggctctgcaagggactcctgtttattttccagatcctgttggttttca 423
Query: 181 tttggaactttgtaacttgattaatttccccattgtaaaatctattttctgatctctatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tttggaactttgtaacttgattaatttccccattgtaaaatctattttctgatctctatt 363
Query: 241 aataacttgtttctctgaagacagaaccctgacctttgatgtagctgtggtgatcctgga 300
||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 362 aataacttgggccactgaagacggaaccctgacctttgatgtagctgtggtgatcctgga 303
Query: 301 gccaagcctctctcagtccctaagtaaaagctacaagaaaagtaaag 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gccaagcctctctcagtccctaagtaaaagctacaagaaaagtaaag 256
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_i18.g1 MSMg01no136_i18.g1 CHROMAT_FILE:
MSMg01no136_i18.g1 PHD_FILE: MSMg01no136_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:58 2005
(260 letters)
>mm_chr10_6240533_6241192
Length = 660
Score = 466 bits (241), Expect = e-136
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 1 caaaggtgaaaggggaggaagtcacgtgcagcaacttacaaaaagaacagtgtctgggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaggtgaaaggggaggaagtcacgtgcagcaacttacaaaaagaacagtgtctgggaa 260
Query: 61 ggatgctgtaattacacagcacatagtgttccttcagagaccttactaattaattgcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatgctgtaattacacagcacatagtgttccttcagagaccttactaattaattgcaac 320
Query: 121 cacatacttgacactaatgcttaaggaatattcccgtggtagacagacagatgacagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacatacttgacactaatgcttaaggaatattcccgtggtagacagacagatgacagaat 380
Query: 181 gtaattgcttatgattcaacatacaactatttagaacattttagagccatatcagttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaattgcttatgattcaacatacaactatttagaacattttagagccatatcagttgtg 440
Query: 241 g 241
|
Sbjct: 441 g 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 260
Length of database: 660
Length adjustment: 9
Effective length of query: 251
Effective length of database: 651
Effective search space: 163401
Effective search space used: 163401
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
