Query= MSMg01no137_g24.b1 MSMg01no137_g24.b1 CHROMAT_FILE:
MSMg01no137_g24.b1 PHD_FILE: MSMg01no137_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:07 2005
(567 letters)
>mm_chr10_13508125_13509091
Length = 967
Score = 1060 bits (548), Expect = 0.0
Identities = 563/568 (99%), Gaps = 2/568 (0%)
Strand = Plus / Plus
Query: 1 accttatatcgtagacacactttttcccctagaatctttgttatctggtcatgtaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttatatcgtagacacactttttcccctagaatctttgttatctggtcatgtaagaag 260
Query: 61 tatgtacaaatgccgagtttctataagtataagatttctattagcatttttcttggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgtacaaatgccgagtttctataagtataagatttctattagcatttttcttggaatt 320
Query: 121 tcagtgtttgacattaactcattgttgattatataagtaaggatcatttgctacagaggc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagtgtttgacattaactcattgttgattatataagtaaggatcatttgctacagaggc 380
Query: 181 tttatattttattttattttatagaaccatatttactagacctactatgtatcaggccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttatattttattttattttatagaaccatatttactagacctactatgtatcaggccct 440
Query: 241 gtgtttgcatgatcacagtatacctcttgagtgtccacaataagttgtaagttcctcata 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtttgcatgaccacagtatacctcttgagtgtccacaataagttgtaagttcctcata 500
Query: 301 atggaactaatttgagacactcaagactttgatagtggaccccattgtgaacaacttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggaactaatttgagacactcaagactttgatagtggaccccattgtgaacaacttcac 560
Query: 361 -gaatcattcataccaatttatatcacttatacttttcgtgaatactaaaaccagggaga 419
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aga-tcattcataccaatttatatcacttatacttttcgtgaatactaaaaccagggaga 619
Query: 420 atctaggggtcacttggctcagtacccctttgcagatggctcaaatgtgggtagctatga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atctaggggtcacttggctcagtacccctttgcagatggctcaaatgtgggtagctatga 679
Query: 480 gaactgtgtcctggagaaatgcaggcatctgttggggttcagtctgtggtgagttaaagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaactgtgtcctggagaaatgcaggcatctgttggggttcagtctgtggtgagttaaagc 739
Query: 540 aagaatatgagtcacattgttgagtgtg 567
||||||||||||||||||||||| ||||
Sbjct: 740 aagaatatgagtcacattgttgaatgtg 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_g24.g1 MSMg01no137_g24.g1 CHROMAT_FILE:
MSMg01no137_g24.g1 PHD_FILE: MSMg01no137_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:07 2005
(291 letters)
>mm_chr10_13652086_13652773
Length = 688
Score = 445 bits (230), Expect = e-129
Identities = 274/290 (94%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 1 gtaacctttgaggaaaaggtgccattttaaaaagtaataggagagatacaaagaaggtca 60
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 487 gtaacctttgaggaaaaggtgccattttaaaaagcaataggagagatagaaagaaagtca 428
Query: 61 aactgcagcagatcacaaactacagcaggtcacttttaactctttgtggaagagctagaa 120
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cact---gcagatcacaaactacagcaggtcacttttaactctttgtggaagagctagaa 371
Query: 121 gtaagagttttactgaaagctaactcaagggtttggtgttgagaattcgagtatagcagt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 370 gtaagagttgtactgaaagctaactcaagggtttggtgttgagaattcgagtacagccgt 311
Query: 181 gacgatgttggtgagttagaggatgcccggtccctttaacttctgccttcagtagtccgg 240
||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||
Sbjct: 310 gacgatgttggtgagttagaggaggccctgtccctttaacttctgtcttcagtagtccgg 251
Query: 241 gaaagaaaattatatggtcccatttttaaatagagggacaagagttatca 290
||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaaagaaaagcaaatggtcccatttttaaatagagggacaagagttatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 688
Length adjustment: 9
Effective length of query: 282
Effective length of database: 679
Effective search space: 191478
Effective search space used: 191478
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
