TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATGTTTATCAAATCAGCCTATCACTTACCTAAGGATCACTTTTT
AAAGACTTTAATATATGGAGGAAAATCTGTACAGCTGAAAAGGTTACAGC
AGCCAAGTGTCACAAGGTTTGGTAATAAATATAAAAAAGCTGTTAGTGTC
AACAGACCTGTGTTTATAAATTCAGAAACAAATACCTCAAGAAGTATTTA
TCATCCATGACAGTTAAGGAAATGGAAATTAAAATAGTATCCCTGTCAGA
GTGGCTAACATCAACAAAGAACTGATGATAAATGCCTAAAAGGCTATGGA
GGGACAGTAATACTTATTTACTGTTGGCAGGGATGTAAGCTTTTAAAACC
ACTTAAATAAATATGGAAAATCCTTAAAACATCACAAATAAATCACCATA
TGACCCAATTATACTACCTCTTGGCATGTTCCAAAAGGACTATACATTCT
ACTTGAGAGATACTCACTCAGCAGTGTTCATTGCTGCCCAGGCACAATAG
CCTGGAAATAAAAACAATATAGGTTGACTTCCAGAGGCTGAAACAAAGTC
TTTGTTACTGAAAAATACTATTTACCTTAGATACAGGACACAAAGTATCT
GAGCTCAATCATACATGAAATAGGATAGGTAAACTTATTACCAGATACTA
TCATGACATTGCTATGAACATC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTTTCCATGGCTTTAAATTCTACTGTATA
AATTCATCATACTCTCTAGATTAATGAAATCTCAGCCTTTTCATTTGTTA
ATGTTATTGGCCATAGTTCAAAATATATGTAAAAGTGCCAGCTTCTGTCC
ACATTCAGTCAGTAGTCATAGTCCTGCATTTTTTATATATATAAAAACTT
CCTTTTGTCTTTCTTGGTTGTTTTAAGTAATACGTGATACAATATTTAGT
AAAATATGTTTCTACATATTTATATTTGAAGGAATATTATTAAAGAATAT
AATTTGTTCATATTTTCTTGTTTTACACATTGTTGATTCCGGTACTACAA
TTCCATCAATAATAGCCCACTATCCCACTATTTTGTCTTCTTAGGGTCTT
GTGACTGTAATAGTTTGTCAGACTTCCACTATTTGTGAGGAGCCTGACAC
TTTGGGATGTACTGGTGAGAAAATTTGAGGGCGCACCTTCCAAGATATGC
CTGATGTGCTCTTTATGACTTGTGCTTAGAATTTTGTGGAAGTTGATAGT
AGAAGGTCAGTGCATATCATGTTCACACTTGACAAACTTGTGCTATCAAC
ATTACTCCCAATTCTGACATTGGCACCCTGTCTTACAGATAGGCTCTTCA
TGTCTCTCTATCATGATTGTATCCGCN

Query= MSMg01no137_n03.b1 MSMg01no137_n03.b1 CHROMAT_FILE:
MSMg01no137_n03.b1 PHD_FILE: MSMg01no137_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:39 2005
         (546 letters)



>mm_chr10_46480756_46481701
          Length = 946

 Score =  779 bits (403), Expect = 0.0
 Identities = 415/419 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagcctatcacttacctaaggatcactttttaaagactttaatatatggaggaaaatct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcagcctatcacttacctaaggatcactttttaaagactttaatatatggaggaaaatct 360

                                                                       
Query: 61  gtacagctgaaaaggttacagcagccaagtgtcacaaggtttggtaataaatataaaaaa 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtacagctgaaaaggttacagcggccaagtgtcacaaggtttggtaataaatataaaaaa 300

                                                                       
Query: 121 gctgttagtgtcaacagacctgtgtttataaattcagaaacaaatacctcaagaagtatt 180
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 299 gctgttagtgtcaacagacctgtgtttataaattcagaaacaaatatctcaagaagtatt 240

                                                                       
Query: 181 tatcatccatgacagttaaggaaatggaaattaaaatagtatccctgtcagagtggctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tatcatccatgacagttaaggaaatggaaattaaaatagtatccctgtcagagtggctaa 180

                                                                       
Query: 241 catcaacaaagaactgatgataaatgcctaaaaggctatggagggacagtaatacttatt 300
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 179 catcaacaaagaactgatgataaatgcctaaaaggctatggggggacagtaatacttatt 120

                                                                       
Query: 301 tactgttggcagggatgtaagcttttaaaaccacttaaataaatatggaaaatccttaaa 360
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tactgttggcaggaatgtaagcttttaaaaccacttaaataaatatggaaaatccttaaa 60

                                                                      
Query: 361 acatcacaaataaatcaccatatgacccaattatactacctcttggcatgttccaaaag 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  acatcacaaataaatcaccatatgacccaattatactacctcttggcatgttccaaaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no137_n03.g1 MSMg01no137_n03.g1 CHROMAT_FILE:
MSMg01no137_n03.g1 PHD_FILE: MSMg01no137_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:39 2005
         (389 letters)



>mm_chr10_46355034_46355822
          Length = 789

 Score =  706 bits (365), Expect = 0.0
 Identities = 383/389 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttccatggctttaaattctactgtataaattcatcatactctctagattaatgaaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttccatggctttaaattctactgtataaattcatcatactctctagattaatgaaatc 260

                                                                       
Query: 61  tcagccttttcatttgttaatgttattggccatagttcaaaatatatgtaaaagtgccag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagccttttcatttgttaatgttattggccatagttcaaaatatatgtaaaagtgccag 320

                                                                       
Query: 121 cttctgtccacattcagtcagtagtcatagtcctgcattttttatatatataaaaacttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctgtccacattcagtcagtagtcatagtcctgcattttttatatatataaaaacttc 380

                                                                       
Query: 181 cttttgtctttcttggttgttttaagtaatacgtgatacaatatttagtaaaatatgttt 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 cttttgtctttcttggttgttttaagtaatacgtgatacactatttagtaaaatatgttt 440

                                                                       
Query: 241 ctacatatttatatttgaaggaatattattaaagaatataatttgttcatattttcttgt 300
           ||| |||  || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagatagctagatttgaaggaatattattaaagaatataatttgttcatattttcttgt 500

                                                                       
Query: 301 tttacacattgttgattccggtactacaattccatcaataatagcccactatcccactat 360
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttacacattgttgattctggtactacaattccatcaataatagcccactatcccactat 560

                                        
Query: 361 tttgtcttcttagggtcttgtgactgtaa 389
           |||||||||||||||||||||||||||||
Sbjct: 561 tttgtcttcttagggtcttgtgactgtaa 589


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space:   296400
Effective search space used:   296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)