Query= MSMg01no138_j21.b1 MSMg01no138_j21.b1 CHROMAT_FILE:
MSMg01no138_j21.b1 PHD_FILE: MSMg01no138_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:42 2005
(582 letters)
>mm_chr10_51314968_51315949
Length = 982
Score = 1125 bits (582), Expect = 0.0
Identities = 582/582 (100%)
Strand = Plus / Plus
Query: 1 tgacgttctgttcttaagtaactcacagtctgtattccgaaattcatgtacgcagattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacgttctgttcttaagtaactcacagtctgtattccgaaattcatgtacgcagattta 260
Query: 61 ctctctcctctttgttagtgaaaaattctaagcatagtcttctcttatgtcagaggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctctcctctttgttagtgaaaaattctaagcatagtcttctcttatgtcagaggaaaa 320
Query: 121 gtgagacttctctgttttgtccaagcttaaaggacacggaatcaacccatgaatttaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagacttctctgttttgtccaagcttaaaggacacggaatcaacccatgaatttaagg 380
Query: 181 ccactatcccataccccacctgagtagcttgaaagctttctgtccacagcgttcgacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccactatcccataccccacctgagtagcttgaaagctttctgtccacagcgttcgacttc 440
Query: 241 aacacgcttgttctaacttttttccatgaattttctaagttctagaacttgaaatgggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacacgcttgttctaacttttttccatgaattttctaagttctagaacttgaaatgggct 500
Query: 301 tttatagtataacctttccttggtttcctgttaaaactgtgcctgtccaggcgtgaacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttatagtataacctttccttggtttcctgttaaaactgtgcctgtccaggcgtgaacta 560
Query: 361 acactcctctgcctctgcctctctacttatatgctataaggttatagatatatgccacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acactcctctgcctctgcctctctacttatatgctataaggttatagatatatgccacta 620
Query: 421 tattatgttaaattatatatatatcaatgatatacaattaatttcatattgatatagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattatgttaaattatatatatatcaatgatatacaattaatttcatattgatatagtga 680
Query: 481 catatatcactatattatatgtaatcttattttctgtgacatgttagtgttgagtttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catatatcactatattatatgtaatcttattttctgtgacatgttagtgttgagtttatt 740
Query: 541 cataaaatgagattattcataatttactgcatctctgctgtg 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cataaaatgagattattcataatttactgcatctctgctgtg 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_j21.g1 MSMg01no138_j21.g1 CHROMAT_FILE:
MSMg01no138_j21.g1 PHD_FILE: MSMg01no138_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:42 2005
(587 letters)
>mm_chr10_51411360_51412346
Length = 987
Score = 1062 bits (549), Expect = 0.0
Identities = 577/587 (98%), Gaps = 3/587 (0%)
Strand = Plus / Minus
Query: 1 cactcaggctattgattgcctgatgacagagagatcagagccttc-aacacaaggactgt 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 834 cactcaggctattgattgcctgatgacagagagatcagagccttcaaacacaaggactgt 775
Query: 60 ggcagcaaagctgtttctcttgactcaatgtcacttgagttagacagtggttttaaaact 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ggcagcaaagctgtttctcttgactcaatgtcacttgagttagacagtggttttaaaact 715
Query: 120 aacacacacacgcacacacacacacacacacacacacaaataatgttatatttttaaaca 179
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aacacacaca--cacacacacacacacacacacacacaaataatgttatatttttaaaca 657
Query: 180 ggtatgaagaatgatgtaagtctgaaaagactgagaagatttaagctattagttttggta 239
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggtatgaagaatgatgtatgtctgaaaagactgagaagatttaagctattagttttggta 597
Query: 240 gaactaaaacagtagcctactaacctgaacagaacactgtcataactactctatttttat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gaactaaaacagtagcctactaacctgaacagaacactgtcataactactctatttttat 537
Query: 300 agatgataaaagctatactatatgatacaagacaagaggatctctaagatgtattgaagc 359
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 536 agatgataaaagctatactatatgatacgagacaagaggatctctaaggtgtattgaagc 477
Query: 360 aaaaatggagatgggaaagtaggaagtgtatgaaagctcaaacctattgaactgacttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aaaaatggagatgggaaagtaggaagtgtatgaaagctcaaacctattgaactgacttta 417
Query: 420 catgtctatggcaaaagaaagaagtttaactaataaagacccaattgaaggaaatgaagt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 catgtctatggcaaaagaaagaagtttaactaataaagacccaattgaaggaaatgaagt 357
Query: 480 aataaaaataattaaacagtatataataaataatagacagtatcagcagtacttaaacta 539
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 356 aatagaaataattaaacagtatataataaataataaacagtatcagcagtacttaagcta 297
Query: 540 tgggtaaactagcagatttatatgcatttggtcaggtatagtagtag 586
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 296 tgggtaaactagcagatttatatgcatttggtcagatatagtagtag 250
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
