Query= MSMg01no138_k01.b1 MSMg01no138_k01.b1 CHROMAT_FILE:
MSMg01no138_k01.b1 PHD_FILE: MSMg01no138_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:43 2005
(614 letters)
>mm_chr10_72950332_72951347
Length = 1016
Score = 1131 bits (585), Expect = 0.0
Identities = 607/617 (98%), Gaps = 7/617 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaggagggtacctcgttcacagtatctaattatgtcactcacattgtatgttta 63
||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 ggaattcaggagggtacat-gttcacagtatttaattatgtcactcacattgtatgttta 259
Query: 64 gggtgctacatgctatagtcattttgagtgttcaaggagcatccgatcattgcttgaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggtgctacatgctatagtcattttgagtgttcaaggagcatccgatcattgcttgaata 319
Query: 124 tcccagtagtgaatgaatgtagtgtagcactgtagactgcagcaccctacagcctctgat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcccagtagtgaatgaatgtagtgtagcactgtagactgcagcaccctacagcctctgat 379
Query: 184 cccacataagactgaaaatcaatcaatcaatcatcattcaatc----aaaaaaaaaaaag 239
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 380 cccacataagactgaaaatcaatcaatcaatcatcattcaatcaaaaaaaaaaaaaaaag 439
Query: 240 gagggaagaaatggatcttccaactatgtgatcctcttatccataggaggaccaaaggtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gagggaagaaatggatcttccaactatgtgatcctcttatccataggaggaccaaaggtc 499
Query: 300 ccagggggagtaacatgcattttcacttgtattttgtggtccagaaatagatcacatgag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccagggggagtaacatgcattttcacttgtattttgtggtccagaaatagatcacatgag 559
Query: 360 cataggttcatgggagggaaagcaactcctgactttgtccttcctgttgaagaagagaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cataggttcatgggagggaaagcaactcctgactttgtccttcctgttgaagaagagaga 619
Query: 420 gggaaggatacctacagattcctacaggggtcttgatgtattttatgagacttttggatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggaaggatacctacagattcctacaggggtcttgatgtattttatgagacttttggatg 679
Query: 480 tgtgaaagatgatttcagacaatctatagcatatccattccacagcttgataaatacaat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtgaaagatgatttcagacaatctatagcatatccattccacagcttgataaatacaat 739
Query: 540 ctgataaatttttatgacgagaaagcaaaaaaata--gggaatcaattgtcttttgaggg 597
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 740 ctgataaatttttatgacgagaaagcaaaaaaaaaaagggaatcaattgtcttttgaggg 799
Query: 598 aaagaaagcgaaggcgt 614
|||||||||||||||||
Sbjct: 800 aaagaaagcgaaggcgt 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1016
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1006
Effective search space: 607624
Effective search space used: 607624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_k01.g1 MSMg01no138_k01.g1 CHROMAT_FILE:
MSMg01no138_k01.g1 PHD_FILE: MSMg01no138_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:43 2005
(578 letters)
>mm_chr10_73119439_73120416
Length = 978
Score = 576 bits (298), Expect = e-168
Identities = 307/310 (99%)
Strand = Plus / Minus
Query: 1 ctcttagggagcatgtgtttcattatgccttttattaaatgtgttattctttccttccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctcttagggagcatgtgtttcattatgccttttattaaatgtgttattctttccttccta 251
Query: 61 attgggtacattttaattattcatgtgatttgactaagacatgtaaacttgcatttatct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 250 attgggtacattttaattattcatgtgatttgactaagacatgtaaactttcatttgtct 191
Query: 121 tctgtttttatttgtataacattaataattttcatgattccatttgaggatcaccaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tctgtttttatttgtataacattaataattttcatgattccatttgaggatcaccaactg 131
Query: 181 taacaccttttataattatttctttgcagctttcactatacacgttaatttcatcacata 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 130 taacaccttttataattatttctttgcagctttcactatacacgttaatgtcatcacata 71
Query: 241 cagcttttaagtattcactcactgtttgatatagtactaccatacaagaacatgacaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cagcttttaagtattcactcactgtttgatatagtactaccatacaagaacatgacaagc 11
Query: 301 ctgtatttcc 310
||||||||||
Sbjct: 10 ctgtatttcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
