Query= MSMg01no138_p19.b1 MSMg01no138_p19.b1 CHROMAT_FILE:
MSMg01no138_p19.b1 PHD_FILE: MSMg01no138_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:12 2005
(642 letters)
>mm_chr10_32319388_32320430
Length = 1043
Score = 1214 bits (628), Expect = 0.0
Identities = 637/640 (99%), Gaps = 1/640 (0%)
Strand = Plus / Minus
Query: 4 gaattcctgtggctatacgcttgtgttttgtaatgcctttgaacagataatattttaatg 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaattcctgtggctaaaggcttgtgttttgtaatgcctttgaacagataatattttaatg 751
Query: 64 acagtcatgatgaactttacag-tttttttttaatcttcctaaacaccccctcagaacct 122
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 750 acagtcatgatgaactttacagttttttttttaatcttcctaaacaccccctcagaacct 691
Query: 123 cctctcacacctgagaactaattagaaaatatctcccaggtatttagcactttttgaaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 cctctcacacctgagaactaattagaaaatatctcccaggtatttagcactttttgaaga 631
Query: 183 aaagggacaaaaaaatttgtgtcaaaatgattactgccagcttcaaaaccagccacgtaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aaagggacaaaaaaatttgtgtcaaaatgattactgccagcttcaaaaccagccacgtaa 571
Query: 243 gagcttaatggaacactattttttattaatcatcactcataaatgccattgagaaagaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gagcttaatggaacactattttttattaatcatcactcataaatgccattgagaaagaga 511
Query: 303 attatatgttataaatgttacttattatggaacagggcaatcagcttcttttttattaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 attatatgttataaatgttacttattatggaacagggcaatcagcttcttttttattaga 451
Query: 363 tgtcttgggaagaagcaaagagtttgtggcctcaatattaagaagaatccagtgacagga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgtcttgggaagaagcaaagagtttgtggcctcaatattaagaagaatccagtgacagga 391
Query: 423 aagggacaaaaaggagttgattgaactgattaagtgaagagaaatgatttatcttgtttt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aagggacaaaaaggagttgattgaactgattaagtgaagagaaatgatttatcttgtttt 331
Query: 483 caccatatggttttaaaataatacttattgattgagtggtattttattataattacacta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 caccatatggttttaaaataatacttattgattgagtggtattttattataattacacta 271
Query: 543 gtttccctttccacacttcaaaccttccaatggattccctctgtgttctcctgttttata 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtttccctttccacacttcaaaccttccaatggattccctctgtgttctcctgttttata 211
Query: 603 tcatttgctttctctctctctttttctctgtctatctctc 642
||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tcatttgctttctctctctctttttctctgtctatctctc 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1043
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1033
Effective search space: 652856
Effective search space used: 652856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_p19.g1 MSMg01no138_p19.g1 CHROMAT_FILE:
MSMg01no138_p19.g1 PHD_FILE: MSMg01no138_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:13 2005
(619 letters)
>mm_chr10_32184308_32185326
Length = 1019
Score = 1120 bits (579), Expect = 0.0
Identities = 609/619 (98%)
Strand = Plus / Plus
Query: 1 atgaaattcctagacaaatataaaaatctttctacagaataaattctaggaaaattcagt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 atgaaatttctagacaaatataaaaatctttctacagaataaattctaggaaaatccagt 260
Query: 61 gacacgaaaatcaggggactttacgttgctagcataaagtggagcatgtgctatatacct 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacacgaaagtcaggggactttacgttgctagcataaagtggagcatgtgctatatacct 320
Query: 121 ccaactcaactccacattcagcagaataattacaattctggacataatatgtacaccata 180
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 ccatctcaactccacattcagcagaataattacaattctggacataatatgaacaccata 380
Query: 181 taaatagtatttatattacatttttttcaattcttatgcttatttctctattttcatatc 240
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 381 taaatagtatttatattacatttttttcaattcttattcttatttttctattttcatatc 440
Query: 241 ctgatttaacaaaagaaattattttggtccatagtttgtgaaattctgtttacatgctaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 ctgatttaacaaaagaaattattttggtccatagtttgtgaaattctgtttacatggtaa 500
Query: 301 actaatcacagttacttgtcctcagtagtcacatatcttacttagccacactttctgatt 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actaaccacagttacttgtcctcagtagtcacatatcttacttagccacactttctgatt 560
Query: 361 cctaacagtaactctcataccagaatttaattttcaacaaactcgcacagactctgagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctaacagtaactctcataccagaatttaattttcaacaaactcgcacagactctgagtt 620
Query: 421 ctagaactacacttcccattatactagacaccagtcacacagaaatgtaatgcgtttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 ctagaactacacttcccattatactagacaccagtcacacagaaatgtaatgcttttgaa 680
Query: 481 aatccttcttccaagccaatagattctgtgattataataaacatactacttctcaataaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatccttcttccaagccaatagattctgtgattataataaacatactacttctcaataaa 740
Query: 541 ttgctaagaaacatttcattaagtactttataccaatcacacacccgaaatacacctatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgctaagaaacatttcattaagtactttataccaatcacacacccgaaatacacctatt 800
Query: 601 ttggatactttgagttaga 619
|||||||||||||||||||
Sbjct: 801 ttggatactttgagttaga 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
