Query= MSMg01no139_b24.b1 MSMg01no139_b24.b1 CHROMAT_FILE:
MSMg01no139_b24.b1 PHD_FILE: MSMg01no139_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:24 2005
(648 letters)
>mm_chr10_10464284_10465331
Length = 1048
Score = 1062 bits (549), Expect = 0.0
Identities = 621/645 (96%), Gaps = 2/645 (0%)
Strand = Plus / Plus
Query: 5 gaattcactttatgctacatgatgattaactgaactaattactggagggccaagagcatg 64
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaatttactttatgctacatgacaattaactgaactaattactggagggccaagagcacg 264
Query: 65 tgacatatgacaggagctagacatcaaagggaggcgatggggagagaaggtaaactacgt 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgacatatgacaggagctagacaccaaagggaggcgatggggagagaaggtaaactacgt 324
Query: 125 tgatcaacttcatgcaggagaaaatgacaccgtgaaaacggattaagggaagactccaaa 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 tgatcaacttcatgcaggagaaaatgacaccgtgaaaacggatcaagggaagactccaaa 384
Query: 185 gttcaaatgtaattagagatgaagtagacagacgccgatgatcaacacgacttaacagta 244
||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 385 gttaaaatgtaactagagatgaagtaaacagacgctgatgatcaacacgacttaacagta 444
Query: 245 ggaaagcaagaaggaaatgtgcgtttactgggtgtaaaaatg-ttccagtcctgcgctaa 303
|||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |||||
Sbjct: 445 ggaaagcaagaaggaaatgtgcctttactgggtgtaaaaatgcttc-agtcctgtgctaa 503
Query: 304 ttaaacactgaataaattccatgtgtgtcttgagttctgttatcactactattttatcac 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttaaacactgaataaattccatgtgtgtcttgagttctgttatcactactattttatcat 563
Query: 364 catcatcattgtcatcgtcatcatcattcttattgttattgccattaggaatcatgaagg 423
||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||
Sbjct: 564 catcatcattgtcatcgccgtcatcattcttattattattgccattaggaatcatgaagg 623
Query: 424 ggggttgaaaatgtgaccttctactacaccttatttccaatggactcaggttgacagtag 483
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 624 agggttgaaaatgtgaccttctattacaccttatttccaatggactcaggttgacaatag 683
Query: 484 tgggactagattgataaaccatctctcttctaagcctccaatcctttcatttcttctgat 543
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgggactagatggataaacaatctctcttctaagcctccaatcctttcatttcttctgat 743
Query: 544 gtcatctcctaaggtacttagagtctcacattcccaggtcctgggtcatgcatcccactc 603
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtcatctcctaaggtactcagagtctcacattcccaggtcctgggtcatgcatcccactc 803
Query: 604 acattacaatcagcatctgttcccgcctaactggcatcttagaag 648
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 acattacaatcagcatctgttcccgcctaactggcatcttagaag 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_b24.g1 MSMg01no139_b24.g1 CHROMAT_FILE:
MSMg01no139_b24.g1 PHD_FILE: MSMg01no139_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:25 2005
(622 letters)
>mm_chr10_10563760_10564780
Length = 1021
Score = 1195 bits (618), Expect = 0.0
Identities = 621/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Minus
Query: 1 tagatttacctagaactacttttctctttcttcttgcctctgaaatgagaatgtttgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tagatttacctagaactacttttctctttcttcttgcctctgaaatgagaatgtttgcca 751
Query: 61 tgcctcttccgttattgtattttgaaggatgtaacttattgacttcatgagctcagagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgcctcttccgttattgtattttgaaggatgtaacttattgacttcatgagctcagagct 691
Query: 121 ggatagcagcatgcactaatcttattcatatatatatatttcaaatatgattctgaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ggatagcagcatgcactaatcttattcatatatatatatttcaaatatgattctgaactt 631
Query: 181 cagatctttgagttgacagtgaagcaaggcaagacctttggggcctgaacaaaagttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cagatctttgagttgacagtgaagcaaggcaagacctttggggcctgaacaaaagttgtt 571
Query: 241 tgcaagtaaaaaagacatgattgggtggctgaggaagacatgttataataggaatgtctt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tgcaagt-aaaaagacatgattgggtggctgaggaagacatgttataataggaatgtctt 512
Query: 301 ccccaaagtttatatattataaccaatctctaacatgacattttgaggaacattttcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccccaaagtttatatattataaccaatctctaacatgacattttgaggaacattttcatc 452
Query: 361 agtacaagaaggcaaaggttcctaggttaaatggtaagagttatctttccttctacttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agtacaagaaggcaaaggttcctaggttaaatggtaagagttatctttccttctacttaa 392
Query: 421 actgctttattgattacttaagattcttatagctttggaatcagactatgtcacttcaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 actgctttattgattacttaagattcttatagctttggaatcagactatgtcacttcaca 332
Query: 481 agtgaaaataaattctttctactgggaactatcatttatatatagcttcttgactggggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agtgaaaataaattctttctactgggaactatcatttatatatagcttcttgactggggg 272
Query: 541 tgggacttatgccaacctacccttctctgtgctgggactttgtctgccttgagcttgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgggacttatgccaacctacccttctctgtgctgggactttgtctgccttgagcttgaac 212
Query: 601 gggtcttgtgctgtcacagact 622
||||||||||||||||||||||
Sbjct: 211 gggtcttgtgctgtcacagact 190
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space: 618732
Effective search space used: 618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
