GGGATTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAATATCCACTCTGTCCATAAGAGTAGGAAATTAGGAGTAGA
GCTATAGGGCTAAAGTTACTCAGGACTATCTGAAGGCCATACGTCTTTAG
GTCATGTTGGAAGGATGAATAGGTTGGGTCCTCATATCAGCATTCATCCA
CAAAATCCTGATGCACTGGAAAAAAAAAGGTGGGGCAGAGAGTACATAAA
GAGTAAAAGCTATTTCTCTGAACTCCATGATCCCTAAGACACTTTTAGAA
AGAACTGTTACAGTTAGGGCTGTTATTCCCACATCATTTAATTAAGAAAA
CCCACAGCTAGAGAGATAGATCAGAGATTAAAAGTGTCCTCTGATCTTCC
AGAGTATTGAATCCAGTATCAAACATCCACACCAGGAAGCTTGTAGCCTG
AGAGCAGCAATAGGGGCTTGATTAGCTCTCCTGAGCAGCAATAGGGGCTT
GATTAACTCTCCTGGACAAAACAGGCACCTGCACTCAATGTACACAGCCA
CATGCATGCATATAAATGCAATATTTAAGGAAAATTGTTATTTTTCTAAA
ACCAAGAAATTCTTTCATAGTTCCCCCCCCCCCCCAGATTTGTCTTCTGG
TTGAATCCAGATCCTGTCAAGTTCAAATTATTAACAATCACATGATTTCT
TTTTTTCGCTCTC

TTTTTTTTTCTTTTTTTTTTTCCCTTTTTCCCTTTCTTCTCTTTCCCTNT
TCTTTTTTTCCCCTCCTCCCTTTTTTTTTTCCTCCCCTCCCCTCCTCCCC
TCTATTACCCTCTTCATTCTTTTCTTTTTCGCGTGTCGCTTGTGTCTCCG
GTCTGTGCGGACATAATCGTAGTGCATTTTGTGATTCACACCGACAGACG
GGCGCGGGGTCCGGACGCCCGCCGACACGTTTGTGTGTCGTGGGCGTCTC
CCGGTTCCGCTTCCCTCGTACGTCTGAGGGACGCCGCTCTTCCCCCTCCC
TATTTCCTCTTTCCTTCCCCCCTCCGCTCTTCTTTTTTATATCCAGCCCG
GTGTCTCCGTGCGCCCGTGCCTGCGTTACCCCCCCGGACATCGCGCGTTT
TGAGTTGAGTGGCGCGTTGGCCGGCCTCCCCTCAATTTTTCCTCCCTCCG
CCGCCGCCGTTCGCCTTTTTTTCGTTTCCCTGCGTCCGCTACTTGCTTCT
TTTGTCCAACCTCCCTTCCGCCGGTTCGTTGTTCGGTAGGATCCCGCGCA
GTATTCGCCCTCTTGACCTAGTATAGTGATATACGTCACCACCCTGGTGT
GCGCTGTTGCCCCGTTTTCCGTCACGTGCATTAACACACCTGCTGCCCTG
CGCGTTCTTCGTCACGCGTGACTCACGTGCACACGCAAAATTCCTTACCC
AGCGGTAAGACACATTAACTCCTGTACCACCGTATCCCGTTATTTCTTCT
GCGGTTCACAGCAGACCCCGACCCCCCCCGTTATATTCCCTTTTCCT

Query= MSMg01no139_k05.b1 MSMg01no139_k05.b1 CHROMAT_FILE:
MSMg01no139_k05.b1 PHD_FILE: MSMg01no139_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:06 2005
         (664 letters)



>mm_chr10_113148343_113149406
          Length = 1064

 Score = 1214 bits (628), Expect = 0.0
 Identities = 652/660 (98%), Gaps = 2/660 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaatatccactctgtccataagagtaggaaattaggagtagagctatagggctaa 64
           |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattcaatatccactttgtccataagagtaggaaattaggagtacagctatagggctaa 264

                                                                       
Query: 65  agttactcaggactatctgaaggccatacgtctttaggtcatgttggaaggatgaatagg 124
           | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 acttactcaggactatctgaaggccatacttctttaggtcatgttggaaggatgaatagg 324

                                                                       
Query: 125 ttgggtcctcatatcagcattcatccacaaaatcctgatgcactggaaaaaaaaaggtgg 184
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 325 ttgggtcctcatatcagcattcatccacaaaatcccgatgcactggaaaacaaaaggtgg 384

                                                                       
Query: 185 ggcagagagtacataaagagtaaaagctatttctctgaactccatgatccctaagacact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcagagagtacataaagagtaaaagctatttctctgaactccatgatccctaagacact 444

                                                                       
Query: 245 tttagaaagaactgttacagttagggctgttattcccacatcatttaattaagaaaaccc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttagaaagaactgttacagttagggctgttattcccacatcatttaattaagaaaaccc 504

                                                                       
Query: 305 acagctagagagatagatcagagattaaaagtgtcctctgatcttccagagtattgaatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acagctagagagatagatcagagattaaaagtgtcctctgatcttccagagtattgaatc 564

                                                                       
Query: 365 cagtatcaaacatccacaccaggaagcttgtagcctgagagcagcaataggggcttgatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagtatcaaacatccacaccaggaagcttgtagcctgagagcagcaataggggcttgatt 624

                                                                       
Query: 425 agctctcctgagcagcaataggggcttgattaactctcctggacaaaacaggcacctgca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agctctcctgagcagcaataggggcttgattaactctcctggacaaaacaggcacctgca 684

                                                                       
Query: 485 ctcaatgtacacagccacatgcatgcatataaatgcaatatttaaggaaaattgttattt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctcaatgtacacagccacatgcatgcatataaatgcaatatttaaggaaaattgttattt 744

                                                                       
Query: 545 ttctaaaaccaagaaattctttcatagttcccccccccccccagatttgtcttctggttg 604
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 745 ttctaaaaccaagaaattctttcatagttcccccccccccc-agatttgtcttctggttg 803

                                                                       
Query: 605 aatccagatcctgtcaagttcaaattattaacaatcacatgatttctttttttcgctctc 664
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 804 aatccagatcctgtcaagttcaaattattaacaatcacatgattt-tttttttcgctctc 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)