Query= MSMg01no140_d08.b1 MSMg01no140_d08.b1 CHROMAT_FILE:
MSMg01no140_d08.b1 PHD_FILE: MSMg01no140_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:52 2005
(402 letters)
>mm_chr10_109602390_109603192
Length = 803
Score = 681 bits (352), Expect = 0.0
Identities = 385/396 (97%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 8 tgatttgaaacactgtcttc-aaatcaaatcttactccgttctaaaatgtacgtggtatg 66
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 603 tgatttgaaacactgtcttcaaaatcaaatcttacgccgttctaaaatgtacgtggtatg 544
Query: 67 gtattatcacttgcatagtcgagtcttctgtgacccacagactagccaatgttgaagcaa 126
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gtattatcacttgcgtagtcgagtcttctgtgacccacagactagccaatgttgaagcaa 484
Query: 127 gtgtacaggggattaaattggatgcagcagtgtagagttacttgcctaagttaactcgtt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtgtacaggggattaaattggatgcagcagtgtagagttacttgcctaagttaactcgtt 424
Query: 187 aagcaaagtctgtctttcacaagatctcactgtttgtatacagagttaagtaccgaagca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aagcaaagtctgtctttcacaagatctcactgtttgtatacagagttaagtaccgaagca 364
Query: 247 ggaaccaagtgtctatataccttttcaaagacaagttgctgcctaggtagatcaaggctg 306
||||||||||| ||| | |||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 363 ggaaccaagtggctagacaccttttcaaagacaagtcgctgcctaggtagatctaggctg 304
Query: 307 tgaaataaacctcatcttcttatcagcattttataatcttaaattactgctcagcgtgcg 366
||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 303 tgaaataaacctcatcttcttatcagcattttataatcttaaactactgctcagtgtgtg 244
Query: 367 tagcttttgcttgctttcacttcttatgcctaacag 402
||||||||||||||||||||||||||||||||||||
Sbjct: 243 tagcttttgcttgctttcacttcttatgcctaacag 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 803
Length adjustment: 9
Effective length of query: 393
Effective length of database: 794
Effective search space: 312042
Effective search space used: 312042
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_d08.g1 MSMg01no140_d08.g1 CHROMAT_FILE:
MSMg01no140_d08.g1 PHD_FILE: MSMg01no140_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:52 2005
(362 letters)
>mm_chr10_109496082_109496843
Length = 762
Score = 596 bits (308), Expect = e-175
Identities = 343/362 (94%), Gaps = 12/362 (3%)
Strand = Plus / Plus
Query: 1 ttttaacactgaaacattctgggtgcccttgtctgttcttacctataaactaaaaggaaa 60
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 213 ttttaacactgaaacattctgggtgcccttatctgttcttacctataaaccaaaaagaaa 272
Query: 61 ttttaaaaatataaataaataaataaataaataaataaataaataaaaatataaataaat 120
|||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 273 ttttaaaaatatgaataaataaataaataaataaat------------atataaataaat 320
Query: 121 ataaataaataaataaatcttgtctgatgccttctaaagtaaatctaaccctgagcttgc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ataaataaataaataaatcttgtctgatgccttctaaagtaaatccaaccctgagcttgc 380
Query: 181 gggtactggcactctgaggtagtagttctgccccaacaagagaaacacaaacatcctgtc 240
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 381 gggtactggcactctgaggtagtagttctgccccgacaagaaaaacacaaacatcctgtc 440
Query: 241 tacatattcccttagaaaatgttcagcagtttcctcccaagcttccatgtcaaaatggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacatattcccttagaaaatgttcagcagtttcctcccaagcttccatgtcaaaatggag 500
Query: 301 tatgttgcatgttttacaccaaagaccagttctgagccaagtttaaattaagaacaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgttgcatgttttacaccaaagaccagttctgagccaagtttaaattaagaacaaaag 560
Query: 361 tc 362
||
Sbjct: 561 tc 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
