Query= MSMg01no140_f02.b1 MSMg01no140_f02.b1 CHROMAT_FILE:
MSMg01no140_f02.b1 PHD_FILE: MSMg01no140_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:00 2005
(327 letters)
>mm_chr10_119789291_119790017
Length = 727
Score = 503 bits (260), Expect = e-147
Identities = 313/342 (91%), Gaps = 21/342 (6%)
Strand = Plus / Minus
Query: 3 ggaattccatctcct--gaccccctcctgattgcttttgccttctcc-ctcatatgc--- 56
||||||||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 550 ggaattccatctcctggga--gcctcctgattgcttttgccttctccactcatatgcagg 493
Query: 57 -------------aggtctgatgcataccctagcgaggtatgtgttttaattccagtccg 103
|||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 492 ctgagaggcctttaggtctgatgcataccctagcgaggtatgtgtttcaattccagtcct 433
Query: 104 ttggcccccatcaacttatatatcccatcgtctaatcttgattctgatgaggtctaagga 163
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 432 ttggcccccatcaacttatatatcccatcgtctaatcttgattctgatggggtctaagga 373
Query: 164 ggaagaaattaatgtgttcattgatctgctgtttatcagtaactatccacgcgtgaatct 223
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 372 ggaagaaattaatgtgttcattgatctgctgtttatcagtaactatccacacgtgaatct 313
Query: 224 gagaagtgttaattattataatccccatcacatgcacaaacatgtacgtataccccatct 283
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 312 gagaagtgttaattattataatccccatcacatgcacaaacatgtatgtataccccgtct 253
Query: 284 ctctctctctctctctctctctctctctctctctctctctct 325
||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 252 ctctctctctctctccctctctctctctctctctctctctct 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_f02.g1 MSMg01no140_f02.g1 CHROMAT_FILE:
MSMg01no140_f02.g1 PHD_FILE: MSMg01no140_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:01 2005
(228 letters)
>mm_chr10_119632511_119633138
Length = 628
Score = 395 bits (204), Expect = e-114
Identities = 222/228 (97%)
Strand = Plus / Plus
Query: 1 cagtcctgatttccttttgttgatgaatagcaatgtggaagtgtaagctgaataaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcctgatttccttttgttgatgaatagcaatgtggaagtgtaagctgaataaaccct 260
Query: 61 ttccttgccaacttgcttcttggtcatggtgttttgtgcaggaatagaaactctgactaa 120
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ttcctccccaacttgcttcttggtcatggtgttttgtgcaggaatagaaactttgactaa 320
Query: 121 aacaagcactaagcacgcctcagaactgtcaaggtcatccaaaagcagcctgagatgaga 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaagcactaagcatgcctcagaactgtcaaggtcatccaaaagcagcctgagatgaga 380
Query: 181 cagtccaaaggagaaagagtgtgtgtgcggaattgtgacatggtaact 228
|||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 cagtacaaaggagaaagagtgtgtgtgtggaattgtgacatggtaact 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|