Query= MSMg01no141_a04.b1 MSMg01no141_a04.b1 CHROMAT_FILE:
MSMg01no141_a04.b1 PHD_FILE: MSMg01no141_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:56 2005
(666 letters)
>mm_chr10_24807184_24808250
Length = 1067
Score = 677 bits (350), Expect = 0.0
Identities = 362/366 (98%), Gaps = 1/366 (0%)
Strand = Plus / Minus
Query: 1 ataattccatactgccactctgaggtgtgaactaaatacgggctacatgctagcttataa 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ataattccatactgttactctgaggtgtgaactaaatacgggctacatgctagcttataa 307
Query: 61 gcaatagagagaacatgttctttgatttatttattcatttatgtttttactttttaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaatagagagaacatgttctttgatttatttattcatttatgtttttactttttaagtt 247
Query: 121 tttaaactggtgggtttttatttccc-atttttttcctgttttctatttttttgaacttt 179
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 246 tttaaactggtgggtttttatttccctttttttttcctgttttctatttttttgaacttt 187
Query: 180 taaaaaaattgatctttgtgtgtgtgaaattcacatcatgtatgccgatcctacttcatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 taaaaaaattgatctttgtgtgtgtgaaattcacatcatgtatgccgatcctacttcatg 127
Query: 240 cttgcaacctccccctaaagaaaacaaaacaatatttctctgtggaagctacagtgtgtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cttgcaacctccccctaaagaaaacaaaacaatatttctctgtggaagctacagtgtgtc 67
Query: 300 ccagtgtgtcatacagtatacccttttgcccaaacagctctacttgcaaacgctcatcgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccagtgtgtcatacagtatacccttttgcccaaacagctctacttgcaaacgctcatcgc 7
Query: 360 agttgg 365
||||||
Sbjct: 6 agttgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1067
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1057
Effective search space: 693392
Effective search space used: 693392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_a04.g1 MSMg01no141_a04.g1 CHROMAT_FILE:
MSMg01no141_a04.g1 PHD_FILE: MSMg01no141_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:56 2005
(674 letters)
>mm_chr10_24676670_24677742
Length = 1073
Score = 1210 bits (626), Expect = 0.0
Identities = 662/674 (98%), Gaps = 1/674 (0%)
Strand = Plus / Plus
Query: 1 atttgtgtggcaagcactttacagactgacccttttctctagcttctgacatttatagac 60
||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||
Sbjct: 201 atttgtgtggcaagcactttacagactgaatcatttctctagcttctgaaatttatagac 260
Query: 61 tgtgaactaaaaacccttaagtccatagtgatagcaatgagaaggaatggtgtgggggtg 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 tgtgaactaaaaacccttaagtccatagtgatagcaacgagaaggaatggtgtgggggtg 320
Query: 121 gggaaagacctcaccgttcactgtttgaggtcctaagtaaataaactaacacatagcttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gggaaagacctcaccgttcactgtttgaggtcctaagtaaataaactaacacttagcttt 380
Query: 181 ggagtatagagaacagagaaaggtttaacccacttttgagaaaggctggacttcagggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagtatagagaacagagaaaggtttaacccacttttgagaaaggctggacttcagggca 440
Query: 241 acccaaagggcccagctggtgaagtgtcccgagtcagcaccatcttaacaacacttcaca 300
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 acccaaagggcccag-tggtgaactgtcccgagtcagcaccatcttaacaacacttcaca 499
Query: 301 cctggctaaaatacagaccacctttgaacttgtgaggatacttaatcagtgactattggg 360
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 500 cctggctaaaatacagaccaccaatgaacttgtgaggatacttaatcagtgactactggg 559
Query: 361 aaacagggcatctgtgcgggggccaccgtaagcccggagactggtttctggttgcagtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaacagggcatctgtgcgggggccaccgtaagcccggagactggtttctggttgcagtga 619
Query: 421 agagatcaacatgtcgctccaccccagtggcctctcttagcatctctaggttgtcaaaga 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agagatcaacatgccgctccaccccagtggcctctcttagcatctctaggttgtcaaaga 679
Query: 481 gatctcacctgatactgaagtaacacgcacaaggcagaatgcattctagcctgaggcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gatctcacctgatactgaagtaacacgcacaaggcagaatgcattctagcctgaggcatt 739
Query: 541 tacatagaatggagactttatattccatttaagaaataagcttaccaatagaagaatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tacatagaatggagactttatattccatttaagaaataagcttaccaatagaagaatgaa 799
Query: 601 acagatgacctcagaacttgagttgtgattattttcctcatggcgcacaatctcctaggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acagatgacctcagaacttgagttgtgattattttcctcatggcgcacaatctcctaggt 859
Query: 661 aagtcggcgtcccg 674
||||||||||||||
Sbjct: 860 aagtcggcgtcccg 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1073
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1063
Effective search space: 705832
Effective search space used: 705832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
