Query= MSMg01no141_b23.b1 MSMg01no141_b23.b1 CHROMAT_FILE:
MSMg01no141_b23.b1 PHD_FILE: MSMg01no141_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:10 2005
(695 letters)
>mm_chr10_41762242_41763336
Length = 1095
Score = 1220 bits (631), Expect = 0.0
Identities = 677/699 (96%), Gaps = 13/699 (1%)
Strand = Plus / Minus
Query: 1 gatatttttggtagttaaagcaaaatctcgttgaacataacaaaatcccacagagggaaa 60
|||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||
Sbjct: 760 gatatttttggtagttaaagcaaaatcttgcagaacataacaaaatcaaacagagggaaa 701
Query: 61 tgtggggctcagcttaaaatacagctgggcaagcccacactcagttgctggaatagcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tgtggggctcagcttaaaatacagctgggcaagcccacactcagttgctggaatagcagg 641
Query: 121 cagctgggaaggctaaatttagcttggatccttaaatatggccagttctgatgtccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cagctgggaaggctaaatttagcttggatccttaaatatggccagttctgatgtccacag 581
Query: 181 cctccaggcagagaattctgccccagctcccaagttggaagacaagaaagaatgtttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cctccaggcagagaattctgccccagctcccaagttggaagacaagaaagaatgtttgcc 521
Query: 241 gaaaatgctgaattcacagaaagatcccagtcaatctgctgtgacttctaggctctaaga 300
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 520 gaaaatgctgaattcacagaaacctcccagtcaatctgctgtgacttctaggctctaaga 461
Query: 301 gggttgacttatagcagatcaataggcagacattacgatttgtctggggggtcactcaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gggttgacttatagcagatcaataggcagacattacgatttgtctggggggtcactcaga 401
Query: 361 gcccaaggaccagaacaatgccagacactggaagaggctatgcaacattgtaatgtcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcccaaggaccagaacaatgccagacactggaagaggctatgcaacattgtaatgtcaat 341
Query: 421 ttttaactttcagaagaagctagaatgaactggaatggatttcatgaggatagcaaaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttttaactttcagaagaagctagaatgaactggaatggatttcatgaggatagcaaaagg 281
Query: 481 agagttggcagaatcagcctccaatatgcaccactggacacatgccaggggccttctact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agagttggcagaatcagcctccaatatgcaccactggacacatgccaggggccttctact 221
Query: 541 taggtgctgccctatcccaa--ctatccctta--ggtgcaaaggaccaacccccaactag 596
|||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 220 taggtgctgccctatcccaagg---------aggggtgcaaaggaccaacccccaactag 170
Query: 597 gctcaagtttgattttatcttttgtttaacctcaggaagaagcatgaaggtcctgtcaga 656
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 169 gctcaagtttgattttatcttttgtttaacctcagggagaagcatgaaggttctgtcaga 110
Query: 657 atgtgacatctcccctgatcctaaagacagctctagaag 695
|||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atgtgacatctcccctgatcctaaagacagctctagaag 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_b23.g1 MSMg01no141_b23.g1 CHROMAT_FILE:
MSMg01no141_b23.g1 PHD_FILE: MSMg01no141_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:10 2005
(683 letters)
>mm_chr10_41622079_41623161
Length = 1083
Score = 1243 bits (643), Expect = 0.0
Identities = 667/675 (98%)
Strand = Plus / Plus
Query: 9 acttcattctatgcctgccatatgtaaaatagagcgttctctcttcaggtaagcgattcc 68
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 209 acttcattctatgcctgccatatgtaaaatagagtgttctctcttcaggtaagtgattcc 268
Query: 69 ttctttgaggtggaagctctcatggaaaagatgaggcagttacaggaatgccgagaggag 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttctttgaggtggaagctctcatggaaaagatgaggcagttacaggaatgccgagaggag 328
Query: 129 gaggaggctagccaggaggagatggcgtcgcggtttgagatggaaaagagagagagcatg 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaggaggctagccaggaggagatggcgtcgcggtttgagatggaaaagagagagagcatg 388
Query: 189 tttgtcttctcttcgggtaagaacagccagaatatgctcaatatagtttctcttacaagc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tttgtcttctcttcgggtaagaacagccagaatatgctcaatatagtttctcttacaagc 448
Query: 249 ccaacttttttatttagagaatgtcaatacatttttaaaagcaggcctaaaggtgtgttc 308
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 449 ccaacttttttatttagagaatgtcaatacatttttaaaagcaggcctaaaggtgtgtcc 508
Query: 309 tttcaggaaggctacttgtaagggctttcctccttacaaatacttaagaaaggcaactaa 368
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 509 tttcaggaaggctacttgtaagggctttcctccttacaaatagttaagaaaggcaactaa 568
Query: 369 gaatagcatgccatgtaatacaccaacactctccccagctttcttgtttgctaaatgtta 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaatagcatgccatgtaatacaccaacactctccccagctttcttgtttgctaaatgtta 628
Query: 429 ttactagaagtgattggcaggatgtgtgagccacaccatgcatgcatgtggaggtcagag 488
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttactggaagtgattggcaggatgtgtgagccacaccatgcatgcatgtggaggtcagag 688
Query: 489 gacaactgtcaggaccagttctttcctccccaagtgggtccctcagagtaaactcagggc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gacaactgtcaggaccagttctttcctccccaagtgggtccctcagagtaaactcagggc 748
Query: 549 attgggcttgagggcacgtgccttcacccactgagccacctcaccagcatggatttagtt 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 attgggcttgagggcacgtgccttcacccactgagccacctcaccagcatggatttagtt 808
Query: 609 atcttaaatattaccaaatggccgggcgaggtggcgtacgcctttaatcccagcactcgg 668
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||
Sbjct: 809 atcttaaatattaccaaatggccgggcgaggtggtgcacgcctttaatcccagcacttgg 868
Query: 669 gaggcagaggcaggc 683
|||||||||||||||
Sbjct: 869 gaggcagaggcaggc 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
