Query= MSMg01no143_d19.b1 MSMg01no143_d19.b1 CHROMAT_FILE:
MSMg01no143_d19.b1 PHD_FILE: MSMg01no143_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:44 2005
(551 letters)
>mm_chr10_82495867_82496817
Length = 951
Score = 882 bits (456), Expect = 0.0
Identities = 525/548 (95%)
Strand = Plus / Plus
Query: 4 ggaattccatatgaacccacttaaaatgaactttcttgcctggaggagcccccagtatgt 63
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattccatatgaatccacttaaaatgaacttccttgcctggaggagcccccagtatgt 263
Query: 64 gagaatacccacatgacctcgggccgtattcgtcaaaaaggggacagtgcttatagaggg 123
||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct: 264 gagaatacccacatgacctcgggccatgttcatcaaaaaggggacagtgcttatagaggg 323
Query: 124 atgttgtggacagcaggcaggcaacgcggcatttccagcccccggtttgctcaggttgaa 183
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 324 atgttgtggacagcaggcaggcaatgtggcatttccagcccccggtttgctcaggttgaa 383
Query: 184 gagctaacagggcaggcagcattgtgtgctagatttgccatcttccctcctgcccactgt 243
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 384 gggctaacagggcaggcagcattgtgtgctagattcgccatcttccctcctgcccactgt 443
Query: 244 tccgtgcacgtggtagctgtggctctctattcccatggctcctcctcctcctgtggccta 303
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 tccgtgcacatggtagctgtggctctccattcccatggctcctcctcctcctgtggccta 503
Query: 304 aggagctgtgacagagcctcctgtgcatgcgtatgctctaggcactccgctttacctggt 363
|||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||
Sbjct: 504 aggagccgtgacagagcctcctgtgcatgcatatgctccaggcactccgctttaccttgt 563
Query: 364 ttctccccccacctgtcaccgtcttgtctctacttatgggcatcccaggagctaccgtaa 423
|||| | || |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 564 ttcttctggcagctgtcaccgtcttgtctctacttacgggcatcccaggagctaccgtaa 623
Query: 424 ccttcgcaggctcagcagcaggtactctggggaggggagagtatgacctgcaaagccttt 483
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 624 ccttcgcaggctcagcagcaggtactctggggaggggagagtatgagctgcaaagccttt 683
Query: 484 gcttctgaaaaagtcttggatgtaacagaccaggagctcaagaattctccagcgaagtta 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccttctgaaaaagtcttggatgtaacagaccaggagctcaagaattctccagcgaagtta 743
Query: 544 aaactgta 551
||||||||
Sbjct: 744 aaactgta 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_d19.g1 MSMg01no143_d19.g1 CHROMAT_FILE:
MSMg01no143_d19.g1 PHD_FILE: MSMg01no143_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:44 2005
(642 letters)
>mm_chr10_82661127_82662168
Length = 1042
Score = 907 bits (469), Expect = 0.0
Identities = 527/551 (95%), Gaps = 8/551 (1%)
Strand = Plus / Minus
Query: 92 gagactctttccaagacaaggttgatggcaggggtgactcctgaggcagacctcggacct 151
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1042 gagactctttccaagacaaggttgatggcaagggtgactcctgaggcagacctcggacct 983
Query: 152 ccacatgtgctctgtgatacacgtgtgtccaaatccacccacacacttatatccaaacac 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 ccacatgtgctctgtgatacacgtgtgtccaaatccacccacacacttatatccaaacac 923
Query: 212 aacatgcacgcatgcgcacacacacacacacacactctcacacacacacacacacacaca 271
|||||||||||||||| | | | | | | | | ||||||||||||||||||||
Sbjct: 922 aacatgcacgcatgcg--------cgcgcgcgcgcgcgcgcacacacacacacacacaca 871
Query: 272 ctcacagagacagacagacagacagacataatttggaaaaagccacattgaaagcaaaca 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ctcacagagacagacagacagacagacataatttggaaaaagccacattgaaagcaaaca 811
Query: 332 ttttaaggccccccgatgcatttgggacgagggcagagtggctcttcagggaccttaagg 391
||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ttttaagatcccttgaggcatttgggacgagggcagagtggctcttcagggaccttaagg 751
Query: 392 tccacacccagagcccattctggcattggacagtttgttctttctgtcttcagcttggtt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tccacacccagagcccattctggcattggacagtttgttctttctgtcttcagcttggtt 691
Query: 452 ccaggcagtggctgtttctgacttaacccaaaaggtaaagggcctgactaggcccggctc 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ccaggcagtggctgtttctgacttaacccaaaaggtaaagggcctgactaggcccggctc 631
Query: 512 cttcatgccaatgggaaagatcctgagcctttgtcttttctccaccatgatgtactatca 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cttcatgccaatgggaaagatcctgagcctttgtcttttctccaccatgatgtactatca 571
Query: 572 cctgaaaaatattgtggaagagctgtgggtgtggcctggccgcagagcacttggccagca 631
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ccttaaaaatattgcggaagagctgtgggtgtggcctggccgcagagcacttggccagca 511
Query: 632 tgcgcctcatc 642
|||||||||||
Sbjct: 510 tgcgcctcatc 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
