Query= MSMg01no143_l07.b1 MSMg01no143_l07.b1 CHROMAT_FILE:
MSMg01no143_l07.b1 PHD_FILE: MSMg01no143_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:20 2005
(368 letters)
>mm_chr10_87400059_87400826
Length = 768
Score = 652 bits (337), Expect = 0.0
Identities = 358/365 (98%), Gaps = 2/365 (0%)
Strand = Plus / Plus
Query: 5 gaattcataccatagcactcacattggcacaagtattagtagaaaggcaagttattgagt 64
|||||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattcataccacagta-tcacattggcacaagtattagtagaaaggcaagttatcgagt 263
Query: 65 acagaaattcccctcctgtctaaaggagtccgaacctattttgctttgtgtaagcctacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagaaattcccctcctgtctaaaggagtccgaacctattttgctttgtgtaagcctacc 323
Query: 125 tttaagtctttggaaagttacccaactaggagtcatgtgactggcccttgagcttaagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttaagtctttggaaagttacccaactaggagtcatgtgactggcccttgagcttaagga 383
Query: 185 agttagacagatgttgggtttttttttt-ctttcatattggtccatgtaccattggtagt 243
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 384 agttagacagatgttgggtttttttttttctttcatattggtccatgtaccattggtagt 443
Query: 244 tgatctcaccttgactcccagtctttgttcctttaaaggatgttccactaacatcctgca 303
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 444 tgatctcaccttgactcccagtctttgttcctttaaaggatgttctactaacatcctgca 503
Query: 304 gctgtcctccaaatccctgacggggtttgtctcctatgccccgagtcttctcaggagttc 363
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 504 gctgtcctccaaatccctgacggggtttgtctcccatgccccgagtcttctcaggagttc 563
Query: 364 ctttt 368
|||||
Sbjct: 564 ctttt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_l07.g1 MSMg01no143_l07.g1 CHROMAT_FILE:
MSMg01no143_l07.g1 PHD_FILE: MSMg01no143_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:20 2005
(626 letters)
>mm_chr10_87545209_87546234
Length = 1026
Score = 1125 bits (582), Expect = 0.0
Identities = 600/610 (98%), Gaps = 8/610 (1%)
Strand = Plus / Minus
Query: 21 gattcccaaagtaaggtggagagcaattgaggaagataccttgcattgacttctggtctc 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 gattcccaaagtaaggtggagagcaattgaggaagataccttgcattgacttctggtctc 967
Query: 81 taaacatgtacatttgtacctgtgcaaacatgtgcacccacatacattcatgtatcatca 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 taaacatgtacatttgtacctgtgcaaacatgtgcacccacatacattcatgtatcatca 907
Query: 141 aatatgtgcacagccagcctataaatatactatgcacatatgtatgtacatacatacata 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 aatatgtgcacagccagcctataaatatactatgcacatatgtatgtacatacatacata 847
Query: 201 ctcgaacatataaacaaacaaagatccttctttaaactttgtcagggcacaacatccaaa 260
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 846 ctcgaacatataaacaaacaaagatccttctttcaactttgtcagggcacaacatccaaa 787
Query: 261 ctctctattttgagtcttcactcttgtaatacattataattaaaattatgtatttattag 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ctctctattttgagtcttcactcttgtaatacattataattaaaattatgtatttattag 727
Query: 321 tccataagtgctatacta----gcccccacagtcttgccttcatgacttcattctctgat 376
|||||||||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct: 726 tccataagtgctatactagtttg----cagagtcttgccttcatgacttcattctctgat 671
Query: 377 atatccatgcccactatgggttccagtttagtggcctccattaagggcagacttatcaaa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 atatccatgcccactatgggttccagtttagtggcctccattaagggcagacttatcaaa 611
Query: 437 tatcacacaaagatatgctaggaatagagttatatttgggaagtcttttatatcctaacc 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tatcacacaaagatatgctaggaatagagttatatttgggaagtcttttatatcctaacc 551
Query: 497 tttgccccatcatcataagaatatttactagctaggaggaccatgtccctctaggccttt 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tttgccccatcatcataagaatatttactagctaggaggaccatgtccctctaggccttt 491
Query: 557 ctcaatctatttaatcacaagagggaagttgagatcagcctctttgcctagatggttcct 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctcaatctatttaatcacaagagggaagttgagatcagcctctttgcctagatggttcct 431
Query: 617 aattaacccc 626
||||||||||
Sbjct: 430 aattaacccc 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
