Query= MSMg01no145_k04.b1 MSMg01no145_k04.b1 CHROMAT_FILE:
MSMg01no145_k04.b1 PHD_FILE: MSMg01no145_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:47 2005
(664 letters)
>mm_chr10_102483181_102484245
Length = 1065
Score = 1201 bits (621), Expect = 0.0
Identities = 651/661 (98%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 5 gaattca-ctaagttacccaaaaaatatgaggtgaataaaatttcactagctctgtgacc 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaactaagttacccaaaaaatatgaggtgaataaaatttcactagctctgtgacc 264
Query: 64 ataaacaagcaacagatagccatgcttttaaccaggtagaaatatggttactgcttttag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaacaagcaacagatagccatgcttttaaccaggtagaaatatggttactgcttttag 324
Query: 124 ataaattttatagtatacaagatatactaatggaagcatgtggcaatgattcaaatcatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataaattttatagtatacaagatatactaatggaagcatgtggcaatgattcaaatcatt 384
Query: 184 tccaaaatactggcctctggaaaaggctgatgcattacagttgcttattggcttccctgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 tccaaaatactggcctctggaaaaggctgatgcattacagttgcttattggctgccctgt 444
Query: 244 aagacaccatggatgtgttcataagccaattccttaacataactagatttgttttattct 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 aagacaccatggatgtgttcataagccaattccttaacataactaggtttgttttattct 504
Query: 304 aagttttaaaaggaaggagctgaacctggtactgaccaacaatctttttaatgtataaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagttttaaaaggaaggagctgaacctggtactgaccaacaatctttttaatgtataaaa 564
Query: 364 tttcacaataaatttaagtaattatatacaagcaagaagttcctcaaatcatttttaaaa 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 565 tttcacaataaatttaagtaattatatacaagcaagaagttcctcaaatcatttttaaga 624
Query: 424 gaaactttaaggacaaaagaatactgggaaagaacattattaatgggctggacttacaga 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaaattttaaggacaaaagaatactgggaaagaacattattaatgggctggacttacaga 684
Query: 484 gagggtgtgagtttacagtgcaacggaatggctattctcacatttggagccaaggtgatc 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagggtgtgagtttacagtggaacggaatggctattctcacatttggagccaaggtgatc 744
Query: 544 ttgatacagaaccaccaaggcacttatcgagaagacatttcacctgtgtttctgcagcaa 603
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 745 ttgatacagaaccactaaggcacttattgagaagacatttcacctgtgtttctgcagcaa 804
Query: 604 cagcttataaagcatgtaccagtaagtaacaaggaatataacaatgcatagcttgctcca 663
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 805 cggcttataaagcatgtaccagtaagtaacaaggaataaaacaatgcatagcttgctcca 864
Query: 664 g 664
|
Sbjct: 865 g 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1065
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1055
Effective search space: 689970
Effective search space used: 689970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_k04.g1 MSMg01no145_k04.g1 CHROMAT_FILE:
MSMg01no145_k04.g1 PHD_FILE: MSMg01no145_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:47 2005
(639 letters)
>mm_chr10_102609269_102610308
Length = 1040
Score = 1114 bits (576), Expect = 0.0
Identities = 624/640 (97%), Gaps = 1/640 (0%)
Strand = Plus / Minus
Query: 1 agtaaaattcttgaacttactctgcatttccaaatagtaattcttaaaccaaatataact 60
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 840 agtagaattcttgaacttactctgcatttccaagtagtaattcttaaaccaaatataact 781
Query: 61 gtaaatatagatatttatgtgttaataattcctttgtaataagaaaaccaataaaatatt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gtgaatatagatatttatgtgttaataattcctttgtaataagaaaaccaataaaatatt 721
Query: 121 ttactggatatagttgttctgttcacatgatattggaataccatgaccttgattctgtct 180
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 720 ttactggatatagttgttctgttcacatgatattggaataccacgacattgattctgtct 661
Query: 181 cctaagaataatgccttaataataagtgcattgttagctagctgccagcagccactagta 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cctaagaataatgccttagtaataagtgcattgttagctagctgccagcagccactagta 601
Query: 241 tgccttagtctcacattttcagtggtcatttaaaaagcaaggcacattgaacttgtgtga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 600 tgccttagtctcacattttcagtggtcatttaaaaagcaaggcacattgaacttgtatga 541
Query: 301 aaggaaaacttttttaacgt-ctctcagaatatagtcactctaattttcaaaaggtctgg 359
| ||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atggaaacctttgttaacgtcctctcagaatatagtcactctaattttcaaaaggtctgg 481
Query: 360 ctattttgcagccttttaaatgctattaagtgtccttgtgatccttgttcataaagaatc 419
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 480 ctattttgcagccttttaaatgctattaattgtccttgtgatccttgttcataaagaatc 421
Query: 420 acaattactttaatatacatcagataagataagccaattaaataaaattcagataattat 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 420 acaattactttaatatacatcagataagataagccaattaaataaaatccagataattat 361
Query: 480 atcttaaatgtacaccatttatatagttaataaaactttattgaataaagaataaatttg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 360 atcttaaatgtacaccatttatatagttaataaaactttattgaataaagaataaacttg 301
Query: 540 ggaattgtataagtggaacaaacatggttcaggatgaagagaaaggtcttatacagtaaa 599
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 300 ggaattgtataagtggaacaaacatgcttcaggatgaagagaaagttcttatacagtaaa 241
Query: 600 aatttcacacttgaagtataaactaattctttacccattt 639
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aatttcacacttgaagtataaactaattctttacccattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
