Query= MSMg01no147_f22.b1 MSMg01no147_f22.b1 CHROMAT_FILE:
MSMg01no147_f22.b1 PHD_FILE: MSMg01no147_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:57 2005
(699 letters)
>mm_chr10_97136379_97137478
Length = 1100
Score = 1243 bits (643), Expect = 0.0
Identities = 682/695 (98%), Gaps = 1/695 (0%)
Strand = Plus / Minus
Query: 5 gaattctaaggaaaacgcggttctgattgtttaatatacaagactaaaatatctttaaga 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gaattctaaggaaaacgtggttctgattgtttaatatacaagactaaaatatctttaaga 840
Query: 65 tctttctgatgtatttcacatattttcaaagcagtcttaggtagtagttcattaaagtca 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 cctttctgatgtatttcacatattttcaaagcagtcttaggtagtagttcattaaagtca 780
Query: 125 ataatttagagcctctaccaaattgctcgt-aagttattttcatggatatattatgactg 183
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 779 ataatttagagcctctaccaaattgctcataaagttattttcatggatatattatgactg 720
Query: 184 tcacttttacagctaatgtaaaggtaacataaattcaaaacataaatattgagattacat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcacttttacagctaatgtaaaggtaacataaattcaaaacataaatattgagattacat 660
Query: 244 cttttataaagttagattactgcatattcattacacatgtgactcaatatttaaacacta 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 659 cttttataaagttagattactgcatattcattacacatgtgcctcaatatttaaacacta 600
Query: 304 cattgaaaaatgtgtcttaagagatcatacaaattagtatttattcctttgatacatata 363
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 599 cattgaaaaatgtgtcttaagagatcatacaaattagtatttattccttcgatacatata 540
Query: 364 tatcatataaatgacataatggtctgaatgacagagtggctactgaaatattggcaaaat 423
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 539 tatcatataaatgacataatggtctgaataacagagtggccactgaaatattggcaaaat 480
Query: 424 atgcagagctttgcttagtgatctactatgtaagatgagtggcaatcacacagatacata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atgcagagctttgcttagtgatctactatgtaagatgagtggcaatcacacagatacata 420
Query: 484 tcttgatatataatattaatataagcctaacaggatttggcttcaatggagaatcatgaa 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcttgatatataatattaatgtaagcctaacaggatttggcttcaatggagaatcatgaa 360
Query: 544 agggaatctctgaggtcgctaatgccaacttacatatggagaataagaaaaataacaaaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agggaatctctgaggtcgctaatgccaacttacatatggagaataagaaaaataacaaaa 300
Query: 604 gtgaaaatttcaagaaaaatacaggaatgtacaccaaagatctttcactaaaattgaaag 663
|||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 299 gtgaaattttcaagaaaaatacaggaacgttcaccaaagatctctcactaaaattgaaag 240
Query: 664 atgggagtagggaggcttggcagtggggaatctgc 698
|||||||||||||||||||||||||||||||||||
Sbjct: 239 atgggagtagggaggcttggcagtggggaatctgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1100
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1090
Effective search space: 751010
Effective search space used: 751010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_f22.g1 MSMg01no147_f22.g1 CHROMAT_FILE:
MSMg01no147_f22.g1 PHD_FILE: MSMg01no147_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:57 2005
(667 letters)
>mm_chr10_96938779_96939845
Length = 1067
Score = 1245 bits (644), Expect = 0.0
Identities = 662/670 (98%), Gaps = 4/670 (0%)
Strand = Plus / Plus
Query: 1 tgtctttgttgctaaggtctacagcgatgaaatcccctcaaatcctgacttcattttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtctttgttgctaaggtctacagcgatgaaatcccctcaaatcctgacttcattttgga 260
Query: 61 gaaccagaacctaaacgtaaaacagtctcatcaggtttccgaagatagtcaccggcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaccagaacctaaacgtaaaacagtctcatcaggtttccgaagatagtcaccggcttcc 320
Query: 121 agacctcttagaaaataaaagggtgtctggaggcattgctgggctctggtactcgtcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacctcttagaaaataaaagggtgtctggaggcattgctgggctctggtactcgtcaga 380
Query: 181 actgtagtgttcagggtgtgacttaactcacttggatatgattttggtgaggagtgagta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 actgtagtgttcagggtgtgacttaactcatttggatatgattttggtgaggagtgagta 440
Query: 241 gactttgacagcagtgcaactgcaactgtacttgctggtgggctgtcggtgggaatcacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactttgacagcagtgcaactgcaactgtacttgctggtgggctgtcggtgggaatcacg 500
Query: 301 gtgtgagtggcttttgcaacatctgtggtattcactctgaaccagaacatttcacatatc 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 gtgtgagtggcttttgcaacatctgtggtattcactctgaaccagaatatttcacatatc 560
Query: 361 taaattcccatggtttcagaaaatccaaccctcacattgcagcccggggtaggggagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaattcccatggtttcagaaaatccaaccctcacattgcagcccggggtaggggagctt 620
Query: 421 aagctatctctacaaagcaccgtctcctgcctctgagtcacttttttttttttt----aa 476
||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 621 aagctatctctacaaagcaccgtctcctgcctccgagtcactttttttttttttttttaa 680
Query: 477 gatttattattttatgtatgtgagtacgcagctgctcttttcagacacaccagacgaggg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatttattattttatgtatgtgagtacgcagctgctcttttcagacacaccagacgaggg 740
Query: 537 catcagatcccattacagatggttgtgagccaccatgtagttgctgcgaattgaactcag 596
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 catcagatcccattacagatggttgtgagccaccatgtagttgctgggaattgaactcag 800
Query: 597 gacttctggaagagcagtcagtgctcttaaccactgagatctctccagcccccctgaatc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gacttctggaagagcagtcagtgctcttaaccactgagatctctccagcccccctgaatc 860
Query: 657 actctttacg 666
||||||||||
Sbjct: 861 actctttacg 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
