CCCCCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCAGAATAAGTTCAGTATAAGAAGATTTAAATGTGGAAT
GATTTCATGTCCCAAGTGTGCAACTAAAATATTTAATGCTTCACAGCCTA
TTTATGCTAAGTACTTTGAACTTAGAGACAACCATCATCCACCCCCACTA
GACACCAGCAGTGGTCTAGTACAAGAAATGAAAAGGAAGAAAACCTTTGC
TTTCTTCAGACTCCTAAAGAAGTAACCAGTTAGAAAGACTTGGAATTGGC
TTTACTAAGGGAACTTTGCCTTCCAGTTAAGTCATTTTGCCACGAAGTTC
AATAGAATAGATTTTATTTACAAATTATCTGCTTAACAGTCTGGTAATGC
CTACTGATAGGATTGCGAAAAAGCACCACATAATTAAAACATTATCTCTG
CCCTTCACAATAGTCACAAATATATATAAATATAAAAAAACCTTGGTGTG
ACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAAATTCAAGTCTCT
GAAGAAAGAAATCAATGAAGATCTCAGAAGATGGAAAGATCTCCCATGTT
CATGGATTGGCAGGATTAATATAGCAAAAATGGCTATCTTGCTGAAAACA
ATCCGCAGATTCAATGCAATCTCCATGAAAATTCTAACTCAATTCTTCAC
AGAGCTAGAAAGGGTAATTGGCACACTCATCT

NCCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTA
TCATGAATTGGTGTTGGATCTTGTCGAATGCTTTTTCCGCATATAAGGAG
ATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACGTT
GATGGATTTCAGTATATTAAACCACCCCTGCATCCATGGAATGAAATCTT
CTTGGTCAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGGG
AGAAATTTACTGGGGATTTTTGCATCGATATTCATAAGGAAAATTGGTCT
GAACTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAA
TTTTGTCTCTATAGAATGACCCGCCCATAGTACCTTCTACTCCTATTTTG
TGGAATAGCTTTTGCATAACTGGAATTAGATCTTCTTTGAAGGTCTGATA
GAACTCTGCACTACACCCATCTGGTCCTGGGCTTTTTTTGGCTGGGAGAC
TATTAATGACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGATCA
TTAACTTGATCATGATTTAACTTTGGCACTTGGTATCTGTCTAGAATTCT
GTCCCCTCCCATCCAGGTTTTCCCGCCCCGTTGAGTATACCCTCATGCAT
CAGTGATTTGATGCCGCTCTTTGCATTC

Query= MSMg01no147_p02.b1 MSMg01no147_p02.b1 CHROMAT_FILE:
MSMg01no147_p02.b1 PHD_FILE: MSMg01no147_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:41 2005
         (560 letters)



>mm_chr10_49554454_49555413
          Length = 960

 Score =  980 bits (507), Expect = 0.0
 Identities = 545/559 (97%), Gaps = 8/559 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagaataag-ttcagtataagaagatttaaatgtggaatgatttcatgtcccaa 62
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagaataagctt-agtataagaagatttaaatgtggaatgatttcatgtcccaa 262

                                                                       
Query: 63  gtgtgcaactaaaatatttaatgcttcacagcctatttatgctaagtactttgaacttag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtgtgcaactaaaatatttaatgcttcacagcctatttatgctaagtactttgaacttag 322

                                                                       
Query: 123 agacaaccatcatccacccccactagacaccagcagtggtctagtacaagaaatgaaaag 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agacaaccatcatccacccccactagacaccagcagtggtctagtacaagaaatgaaaag 382

                                                                       
Query: 183 gaagaaaacctttgctttcttcagactcctaaagaagtaaccagttagaaagacttggaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaagaaaacctttgctttcttcagactcctaaagaagtaaccagttagaaagacttggaa 442

                                                                       
Query: 243 ttggctttactaagggaactttgccttccagttaagtcattttgccacgaagttcaatag 302
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttggctttactaagggaaatttgccttccagttaagtcattttgccacgaagttcaatag 502

                                                                       
Query: 303 aatagattttatttacaaattatctgcttaacagtctggtaatgcctactgataggattg 362
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatagattttatttacaagttatctgcttaacagtctggtaatgcctactgataggattg 562

                                                                       
Query: 363 cgaaaaagcaccacataattaaaacattatctctgcccttcacaatagtcacaaatatat 422
           | |||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 563 caaaaaagtaaaacataattaaaacattatctctgcccttcacaatagtcacaaata-at 621

                                                                       
Query: 423 ataaatataaaaaaaccttggtgtgactctaactaaggaagtgaaagatctgtatgataa 482
           ||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 at---t-taaaaaaaccttggtgtgactctaactaaggaagtgaaagatctgtatgataa 677

                                                                       
Query: 483 gaaattcaagtctctgaagaaagaaatcaatgaagatctcagaagat-ggaaagatctcc 541
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 678 gaaattcaagtctctgaagaaagaaatcaatgaagatctcagaagataggaaagatctcc 737

                              
Query: 542 catgttcatggattggcag 560
           |||||||||||||||||||
Sbjct: 738 catgttcatggattggcag 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)