Query= MSMg01no148_g11.b1 MSMg01no148_g11.b1 CHROMAT_FILE:
MSMg01no148_g11.b1 PHD_FILE: MSMg01no148_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:17 2005
(642 letters)
>mm_chr10_66702364_66703405
Length = 1042
Score = 1067 bits (552), Expect = 0.0
Identities = 603/638 (94%), Gaps = 28/638 (4%)
Strand = Plus / Minus
Query: 5 gaattctccacacaccttaaaagcatctataacatcatcttcttaggaaattattctgct 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 gaattctccacacaatttaaaagcatctataacatcatcttcttaggaaattattctgct 844
Query: 65 ttctgcttttgataattaaaaaaccttgctctgcaagcacgccatagacacttgcacact 124
| |||||||||||||||||||||||||||||||
Sbjct: 843 t----------------------------tctgcaagcacgccatagacacttgcacact 812
Query: 125 cgcatatggttctgattcttccccactacaaacacaacattcaccttgtgaaaactcatc 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 811 cgcatatggttctgattcttccccactacaaacacaacattcacctcgtgaaaactcatc 752
Query: 185 ccagagcatccggactcacagaaccttccttctccagcatttagcgtgaaaatacacaaa 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ctagagcatccggactcacagaaccttccttctccagcatttagcgtgaaaatacacaaa 692
Query: 245 actttagctctgaagttacaactagaatgataacaggcctaacaatttagcacattgtat 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 691 actttagctctgaagttacaactagaatgagaacaggcctaacaatttagcacattgtat 632
Query: 305 ttcatctgcatctgttttgttagaaccatagctaactatcaaatctctatataaacttaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttcatctgcatctgttttgttagaaccatagctaactatcaaatctctatataaacttaa 572
Query: 365 gggccaaacttaaaagcagaggccgaaggtgcaggcagctaaattctagagcacttggac 424
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 571 gggccaaacttaaaagcagaggccgaaggtgcaggcagctaaattttagagcacttggac 512
Query: 425 agcatgtacaaaaacaaatctaacacacaaaaattagctggcacactcactgaggttccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agcatgtacaaaaacaaatctaacacacaaaaattagctggcacactcactgaggttccc 452
Query: 485 attgaatatactggcgcaaaggcaatgccagcatctgtagagcccacacgaagcttgcca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 attgaatatactggcgcaaaggcaatgccagcatctgtagagcccacacgaagcttgcca 392
Query: 545 gctgttgtggtcagcaaatcacgtagggttgaaccctgttcgttgctctgggatgctgga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gctgttgtggtcagcaaatcacgtagggttgaaccctgttcgttgctctgggatgctgga 332
Query: 605 ggtgatgtgctgccatttggaaaatcagaggcatcttg 642
||||||||||||||||||||| ||||||||||||||||
Sbjct: 331 ggtgatgtgctgccatttggagaatcagaggcatcttg 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_g11.g1 MSMg01no148_g11.g1 CHROMAT_FILE:
MSMg01no148_g11.g1 PHD_FILE: MSMg01no148_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:17 2005
(325 letters)
>mm_chr10_66558464_66559188
Length = 725
Score = 578 bits (299), Expect = e-169
Identities = 317/323 (98%)
Strand = Plus / Plus
Query: 1 ccgcccccaggctttacctaatttatggccctttatttggtgactttgctttagagcgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccgcccccaggctttacctaatttatggccctttatttggtgactttgctttagagcgca 260
Query: 61 cagggtaaggtgaaagatgggaagagaaccggtttaacttgtattcaaatacctttgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagggtaaggtgaaagatgggaagagaaccggtttaacttgtattcaaatacctttgcag 320
Query: 121 attaaacaacacatctcaacttttcccccctcctctccccatccgcagctctcgtttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaaacaacacatctcaacttttcccccctcctctccccatccgcagctctcgtttgta 380
Query: 181 gcacaatcagtgaactgaggagatgacccaaacaaaggggactggcacctgcgccttctc 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 tcacaatcagtgaactgaggagatgacccgaacaaaggggactggcacctgcgccttctc 440
Query: 241 cattgttaacatttcttcccacccacggtcctccatggtcagcgtttgcccgacctttct 300
||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 441 cattgcaaacatttcttcccacccacggccctccacggtcagcgtttgcccgacctttct 500
Query: 301 agcgcaggctctttcccaggtca 323
|||||||||||||||||||||||
Sbjct: 501 agcgcaggctctttcccaggtca 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
