Query= MSMg01no149_c18.b1 MSMg01no149_c18.b1 CHROMAT_FILE:
MSMg01no149_c18.b1 PHD_FILE: MSMg01no149_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:20 2005
(658 letters)
>mm_chr10_16060402_16061459
Length = 1058
Score = 745 bits (385), Expect = 0.0
Identities = 388/389 (99%)
Strand = Plus / Minus
Query: 5 gaattctcctactctccaaagggaaattttccatacaactaaatagataactccaatcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 593 gaattctcctactctccaaagggaaattttccatacaactaaatagataactccaatgag 534
Query: 65 aaaacattgaattaaaatatatgtcagtatacaatatatagcatagtcttacagggttca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aaaacattgaattaaaatatatgtcagtatacaatatatagcatagtcttacagggttca 474
Query: 125 gtggttggcaactgcttcatatatctattgtggttgatatttttgtattgcctcaatttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtggttggcaactgcttcatatatctattgtggttgatatttttgtattgcctcaatttt 414
Query: 185 taattagaaaaaaataggtaacaaactgatagatagctaagagatggcttttacagagta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 taattagaaaaaaataggtaacaaactgatagatagctaagagatggcttttacagagta 354
Query: 245 cgatgtttacgtatggagttattattcctagataattgtctagaagactaacctaagatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cgatgtttacgtatggagttattattcctagataattgtctagaagactaacctaagatc 294
Query: 305 tttctgtattgaagacacttacagaaagcatggtcaatgaaggagagagcagactaccag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tttctgtattgaagacacttacagaaagcatggtcaatgaaggagagagcagactaccag 234
Query: 365 tagatatcaattttgccttcactttgaat 393
|||||||||||||||||||||||||||||
Sbjct: 233 tagatatcaattttgccttcactttgaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_c18.g1 MSMg01no149_c18.g1 CHROMAT_FILE:
MSMg01no149_c18.g1 PHD_FILE: MSMg01no149_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:21 2005
(625 letters)
>mm_chr10_15964515_15965540
Length = 1026
Score = 1164 bits (602), Expect = 0.0
Identities = 620/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 caattgaggaaactcgaattccgagaagcacctaaagaaatttgtaacatccttaatcat 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caattgaggaaactcgaattctgagaagcacctaaagaaatttgtaacatccttaatcat 260
Query: 61 caaggaaatgcaaatcaaaacaacactgagatttccggtgtttgggtgtttggagcttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggaaatgcaaatcaaaacaacactgagatttccggtgtttgggtgtttggagcttag 320
Query: 121 tgttctgaagcttttaccactagaaggaacacaccctgtatccagcccgtggatgaagaa 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttctgaagcttttaccaccagaaggaacacaccctgtatccagcccgtggatgaagaa 380
Query: 181 aaacgttgatgtcccatacctggcccccattcacttataactaaaacatggcacaacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacgttgatgtcccatacctggcccccattcacttataactaaaacatggcacaacata 440
Query: 241 actggattcaagataaatacccactaatatccctgtttcctacaaagaaacacacctata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actggattcaagataaatacccactaatatccctgtttcctacaaagaaacacacctata 500
Query: 301 gacctggagagaaaataaattgtagcctaacacctcatattcttgctattcaagatacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacctggagagaaaataaattgtagcctaacacctcatattcttgctattcaagatacta 560
Query: 361 tttaagccttaatttcttagagttcttcggatatacgtcttttttagcattattatttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttaagccttaatttcttagagttcttcggatatacgtcttttttagcattattatttct 620
Query: 421 atgcttctgtcattattttatgagacttcaaatgtttacttgtaggaaagttcatggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcttctgtcattattttatgagacttcaaatgtttacttgtaggaaagttcatggttt 680
Query: 481 tttt-gtttgtttttgttttttgtttttcagagaagaaattcacagaattgtattgtaag 539
|||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 tttttgtttgtttttgtttcttgtttttcagagaagaaattcacagaattgtgttgtaag 740
Query: 540 tccccttcaatggcctcttaaatgtatgggaaagaaatggatcaacactacagtgaggca 599
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 tccccttcaatggcctcttaaatgtatggcaaagaaatggatcaacactacagtgaggca 800
Query: 600 ctgaggaacttctgtgcatataagaa 625
||||||||||||||||||||||||||
Sbjct: 801 ctgaggaacttctgtgcatataagaa 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space: 624840
Effective search space used: 624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
