Query= MSMg01no150_e24.b1 MSMg01no150_e24.b1 CHROMAT_FILE:
MSMg01no150_e24.b1 PHD_FILE: MSMg01no150_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:50 2005
(345 letters)
>mm_chr10_60031806_60032550
Length = 745
Score = 557 bits (288), Expect = e-163
Identities = 325/342 (95%), Gaps = 8/342 (2%)
Strand = Plus / Minus
Query: 1 ggagccacatacaaagtaggtgttcaagaaattcatgggttcagtatccccggattctct 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 463 ggagccacatacaaagtaggtgttcaagaaattcatgggttcattatccccgggttctct 404
Query: 61 cacgggcggtggaacactcagctttgtccctgcccctggtcccatttccaaacaggagca 120
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 403 cacgggcggtggaacactcagctttgtccctggccctgatcccatttccaaacaggagca 344
Query: 121 actaaggcccacagtcaaggtcactgttgcacagctcaggaaagaaaatggcctggctgt 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 343 actaaggcccacagtcaaggtcactgttgcacagctcaggaaagaaaacggcctggctgt 284
Query: 181 accactcactcacccgctttccctatgaggtcgctacaggatgtgttgctcagggaggaa 240
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 accactcactcacgtgctttccctatgaggtcgctacaggatgtgttgctcagggaggaa 224
Query: 241 gtgatgagggagtcttttttttttttttttcccaaatggacagaatgtgaactctaagct 300
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 223 gtgatgagggagtcttttttttt--------ccaaatggacagaatgtgaactctaagct 172
Query: 301 gcagacttgccacaccctccagaaggttctagtaccatgccc 342
||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 171 gcagatttgccacaccctccagaaggttctagtagcatgccc 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_e24.g1 MSMg01no150_e24.g1 CHROMAT_FILE:
MSMg01no150_e24.g1 PHD_FILE: MSMg01no150_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:50 2005
(397 letters)
>mm_chr10_59904696_59905492
Length = 797
Score = 702 bits (363), Expect = 0.0
Identities = 388/403 (96%), Gaps = 12/403 (2%)
Strand = Plus / Plus
Query: 1 tccctcaggagctgtccaccttgcttgagacagggtctctcactcggatctggggcttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctcaggagctgtccaccttgcttgagacagggtctctcactcggatctggggcttgc 260
Query: 61 tggtcaggtgaggccagatagccagtgagccccagggacagatcctcctgtctcccgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtcaggtgaggccagatagccagtgagccccagggacagatcctcctgtctcccgtcc 320
Query: 121 ctgccttccagcactgggattactagcaggcaccatcacacttctatgggggtttggagg 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ctgccttccagcactgggattactagcaggtaccatcacacttctatgggggtttggagg 380
Query: 181 atcaaactcagatccttccacatttgtgcacagcatttgactgcagagctgtcctcccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcaaactcagatccttccacatttgtgcacagcatttgactgcagagctgtcctcccag 440
Query: 241 tccctgtaagtctctttagctgtgaccacatccctaccaggtaagtacatataactcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tccctgtaagtctctttagctgtgaccacatccctaccaggtaagtacatataacccgtc 500
Query: 301 ccccattgtggcttctgtatgaaatgtccccacattgaagg------ccccccctccagc 354
||||||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 501 ccccattgtggcttctgtatgaaatgtcctcacattgaaggtttggtc------tccagc 554
Query: 355 tgggatgctatctggggaggtgtgacccagataaaggaagtag 397
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgggatgctatctggggaggtgtgacccagataaaggaagtag 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
