NATCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTAAGGGCAACACTGAAATGAGATCGAGTTGGACATCTTGAAG
TCAAACAAAAAGGCCTCTAAAGACAATCTTTAGTAAGACTGTAATTATAG
ATCAAGTTTTTTCACCTTTAAGTCCCACTCCAAATGTTTGTACCAGCTAG
CCAACCTCATAGACCCTATTCATACCATATACATCCAGAAAGAATAAAAA
CCTGTCTATCCATAGTGAATTTGACTTCTTCTCCCTGATTGGGGTTCACA
TCTAAGTCTCACCTTCCCAGTGGAAAAGGTGTGTAGGACAGTTTGACAGA
CTATATCTCAGTAACTCTTGAAAGTTAATCTATATTTCAACTTTATATCC
CATGTAAAGAATCCAGGAAACACAAATCTCCAAGGCAGAAGATTGCATGT
AAAATCAGTCTGATGGTGATTCTTTGATAAGCTATGCTCTTTCCACCTGT
ATACTGTCCAAATAGCTTTATCATTGAATTTTATATAAAAGAAGATTAGA
GCCAAATGACAGAATAGAAAAAAATATTTTCTTATTTCTGAGGATCCTGA
CCTGTTCTTTCAAGATGAAAATTTGGCTAGACTCTGTCTCCAGCCTGCTA
TTTAGAGATCACTACCCAGGAATGAAATGGGTAGATGTATAAATCCAAGT
CCTTAACATCTN

NCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTGTGAAATCAATAGCAAGCCCTTA
AGAACTCGGCACTTCTGTGCCCACTCTGGAGCAATCACACAGTTCTTTAA
TCTCTGGTTATCACTTTTCAATTGAAACACACGACATTGCTCCTTAAATG
CATCCTTTGCTCTTCCTTATTCTTGTTCCTGGTCCATGATTTGATAGCTT
TTATGTGGGGTAGGGGTTGTAAATGTGTGTGTGTGNNNCCCNNCCCCCNC
CCCCCCCCTCCCCCCCCCCCTTTTTTTTCTTTTCTTTTCCTCCCCTTCTC
TTTCCCCTTCCTTTTCCCCCCTCCTCTCCTCCTTCTCTCTTTTTTTCCTT
CCTTCCTCTTCTTCCTTTGTTGCCCCCCCCCCTTTCTTGCCTTGCGTTTT
GGTCCCTTTCCCCCTCCCGTCCGCCTCTCGCTTTTTCTATTATTTCTCCT
CGCTCCCGCCCCCCCCCCCCGTTCTGTTTTTCCCTTTTCTCTCCTCAGAT
CCCGCCTTTCTTTCCATCGCCTATGAATTGTGCGAATATCCTGTGGATTA
CAATCCCTTTCGTTTATTTACCCATTTGATCCACGTTTAACCTTATCCTT
CCTCTTTTAGAAAAACCGCTCGTAAAACATATTTCACCGTAACGGTGACT
TCCTTGTGTAGGGTTTTTTCCCACCACAACCCTAATTTTATCTGACCATT
ACATTCCGCGTTTATTGCTTCA

Query= MSMg01no150_l10.b1 MSMg01no150_l10.b1 CHROMAT_FILE:
MSMg01no150_l10.b1 PHD_FILE: MSMg01no150_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:20 2005
         (662 letters)



>mm_chr10_96650818_96651879
          Length = 1062

 Score = 1259 bits (651), Expect = 0.0
 Identities = 657/659 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctaagggcaacactgaaatgagatcgagttggacatcttgaagtcaaacaaaaa 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 ggaattctaagggcaacactgaaatgagatcgagttggacatcttgaagtcaaacaaaaa 803

                                                                       
Query: 64  ggcctctaaagacaatctttagtaagactgtaattatagatcaagttttttcacctttaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ggcctctaaagacaatctttagtaagactgtaattatagatcaagttttttcacctttaa 743

                                                                       
Query: 124 gtcccactccaaatgtttgtaccagctagccaacctcatagaccctattcataccatata 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gtcccactccaaatgtttgtaccagctagccaacctcatagaccctattcataccatata 683

                                                                       
Query: 184 catccagaaagaataaaaacctgtctatccatagtgaatttgacttcttctccctgattg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 catccagaaagaataaaaacctgtctatccatagtgaatttgacttcttctccctgattg 623

                                                                       
Query: 244 gggttcacatctaagtctcaccttcccagtggaaaaggtgtgtaggacagtttgacagac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gggttcacatctaagtctcaccttcccagtggaaaaggtgtgtaggacagtttgacagac 563

                                                                       
Query: 304 tatatctcagtaactcttgaaagttaatctatatttcaactttatatcccatgtaaagaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tatatctcagtaactcttgaaagttaatctatatttcaactttatatcccatgtaaagaa 503

                                                                       
Query: 364 tccaggaaacacaaatctccaaggcagaagattgcatgtaaaatcagtctgatggtgatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tccaggaaacacaaatctccaaggcagaagattgcatgtaaaatcagtctgatggtgatt 443

                                                                       
Query: 424 ctttgataagctatgctctttccacctgtatactgtccaaatagctttatcattgaattt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctttgataagctatgctctttccacctgtatactgtccaaatagctttatcattgaattt 383

                                                                       
Query: 484 tatataaaagaagattagagccaaatgacagaatagaaaaaaatattttcttatttctga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tatataaaagaagattagagccaaatgacagaatagaaaaaaatattttcttatttctga 323

                                                                       
Query: 544 ggatcctgacctgttctttcaagatgaaaatttggctagactctgtctccagcctgctat 603
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 322 ggatcctgacctgttctttcaagatgaaaatttggctggactctgtctccagcctgctat 263

                                                                      
Query: 604 ttagagatcactacccaggaatgaaatgggtagatgtataaatccaagtccttaacatc 662
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 262 ttagagatcactacccaggaatgaaatgggtagatgtataaacccaagtccttaacatc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no150_l10.g1 MSMg01no150_l10.g1 CHROMAT_FILE:
MSMg01no150_l10.g1 PHD_FILE: MSMg01no150_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:21 2005
         (211 letters)



>mm_chr10_96576376_96576986
          Length = 611

 Score =  375 bits (194), Expect = e-109
 Identities = 206/210 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgtgaaatcaatagcaagcccttaagaactcggcacttctgtgcccactctggagcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtgaaatcaatagcaagcccttaagaactcggcacttctgtgcccactctggagcaat 260

                                                                       
Query: 61  cacacagttctttaatctctggttatcacttttcaattgaaacacacgacattgctcctt 120
           |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 261 cacacagttctttaatctctggttatgacttttcaattgaaacacatgacattgctcctt 320

                                                                       
Query: 121 aaatgcatcctttgctcttccttattcttgttcctggtccatgatttgatagcttttatg 180
           |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 aaatgcatcccttgctcttccttattcttgttcctggtccatgatttgatagtttttatg 380

                                         
Query: 181 tggggtaggggttgtaaatgtgtgtgtgtg 210
           ||||||||||||||||||||||||||||||
Sbjct: 381 tggggtaggggttgtaaatgtgtgtgtgtg 410


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space:   121604
Effective search space used:   121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)