Query= MSMg01no150_p09.b1 MSMg01no150_p09.b1 CHROMAT_FILE:
MSMg01no150_p09.b1 PHD_FILE: MSMg01no150_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:39 2005
(679 letters)
>mm_chr10_31656439_31657517
Length = 1079
Score = 1243 bits (643), Expect = 0.0
Identities = 667/675 (98%)
Strand = Plus / Plus
Query: 4 ggaattctagacatgtgctcaattactgagatatattactctgcacagtagtgccatttg 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagacatgtgttcaattactgagatatattactctgcacagtagtgccatttg 263
Query: 64 taacttacaatcttttatttaaaacagaagtatagacctcacccaccccacttcaatcag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 taacttacaatcttttatttaaaacagaagtatagacctcacccaccccacttcagtcag 323
Query: 124 ccctctcagcctgcatacatcccctgggattcagatgccatccatgttctagtcccagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccctctcagcctgcatacatcccctgggattcagatgccatccatgttctagtcccagag 383
Query: 184 tccctgttgcgggatatttgatcacgttgtcaatcccaatattgtgaacctgtttcttgt 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 tccctgttgcgggatatttgatcacgttgtcaatcccaatattgtgaaccggtttcttgt 443
Query: 244 tgtggtgtagctcagccctagcacacacctttaattcaaagagctttctgtaaacagtat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtggtgtagctcagccctagcacacacctttaattcaaagagctttctgtaaacagtat 503
Query: 304 taaataaagtcattgataggtcaagacatgtaggtagtgaacataaggaaatagaaagga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaataaagtcattgataggtcaagacatgtaggtagtgaacataaggaaatagaaagga 563
Query: 364 ggggcaatcagttgaagggtatttaagacagcatggagaaggagaaagggctgtgtctcc 423
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 ggggcaatcagttgaagggtatttaagacagcatggagaaggagaaaggcctgtgtctcc 623
Query: 424 ttgggacattggtggagtatgaaggtcagccgggtgcttcctctgcctttctgacctagc 483
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 624 ttgggacattggtggagtatgaaggtcagccaggtgcttcctctgcctttctgacctagc 683
Query: 484 aggcattcactccagaatctgcttcctgattcttaattagtaaaatcaagtgtttggcta 543
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 684 aggcattcactccagaatctgcttcctgagtcttaattagtaaaatcaagtgtttggctt 743
Query: 544 ttaaaaaacaaatgcttctattccttccttcatttccctcctcaggattcctcacagccc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttaaaaaacaaatgcttctattccttccttcatttccctcctcaggattcctcacagccc 803
Query: 604 atcttaatttgttttgtgactctccaccttctgcagacctgttttctccatgaactcata 663
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 804 atcttaatttgttttgtgactccccaccttctgcagacctgttttctccatgaactcata 863
Query: 664 gccaccatacatgta 678
|||||||||||||||
Sbjct: 864 gccaccatacatgta 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_p09.g1 MSMg01no150_p09.g1 CHROMAT_FILE:
MSMg01no150_p09.g1 PHD_FILE: MSMg01no150_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:39 2005
(644 letters)
>mm_chr10_31815138_31816177
Length = 1040
Score = 1180 bits (610), Expect = 0.0
Identities = 634/644 (98%), Gaps = 4/644 (0%)
Strand = Plus / Minus
Query: 1 tgtatagacattaaaattatcaactaagactatgttacttgaacagagaaagttctaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tgtatagacattaaaattatcaactaagactatgttacttgaacagagaaagttctaccc 781
Query: 61 agcagcatataagtaatgacaatcatagaaaaatctaattgtttctgtcacagaaatcat 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 780 agcagcatataagtaatgacaatcacagaaaaatctaattgtttctgtcacagaaatcat 721
Query: 121 gaagttcttcattataattcagcactattttttgtggtctcttatttatgctatttttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaagttcttcattataattcagcactattttttgtggtctcttatttatgctatttttat 661
Query: 181 tttgaaataaaacgaatattgctgaacagttagttttctattcccttaagtaaacattca 240
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 660 tttgaaataaaatgaatattgctgaac----agttttctattcccttaagtaaacattca 605
Query: 241 caagaacttttaaatcttccattaatgtattaattatatgtttatccacaggtattcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 caagaacttttaaatcttccattaatgtattaattatatgtttatccacaggtattcatt 545
Query: 301 aaacaattatacatggcttattagtatctattataaattctactaccctatagttgcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaacaattatacatggcttattagtatctattataaattctactaccctatagttgcttc 485
Query: 361 agtagatgtgattactatagatagagaaatgttgccaagtccttgttgcaaagatctcca 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agtagatgtgattactatatatagagaaatgttgccaagtccttgttgcaaagatctcca 425
Query: 421 aaaatggaacagagaatacaaaattcttgattttggggtgttaataacaaaagagtaact 480
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 424 aaaatggaacacagaatacaaaattcttgattttggggtgttaataacagaagagtaact 365
Query: 481 ttacttaagaggaaattgtttttaaagcccagtttactgtgactattacttgatgggata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttacttaagaggaaattgtttttaaagcccagtttactgtgactattacttgatgggata 305
Query: 541 aacaaaatagtccctactgttctgaaagtagcagtaaaactcatcagaaacaacaaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aacaaaatagtccctactgttctgaaagtagcagtaaaactcatcagaaacaacaaaaaa 245
Query: 601 agatttcagtccaattaatagataccatacaagatttaagaaga 644
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 244 agatttcagtcaaattaatagataccatacaagatttaagaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1040
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1030
Effective search space: 653020
Effective search space used: 653020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
