Query= MSMg01no152_j21.b1 MSMg01no152_j21.b1 CHROMAT_FILE:
MSMg01no152_j21.b1 PHD_FILE: MSMg01no152_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:45 2005
(294 letters)
>mm_chr10_22214003_22214695
Length = 693
Score = 424 bits (219), Expect = e-123
Identities = 278/303 (91%), Gaps = 12/303 (3%)
Strand = Plus / Minus
Query: 1 ccctggctaccaggagcccgccaattcactgtaattctttcaaatgtctttagaaatcta 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ccctggctaccaggagcccaccaattcactgtaattctttcaaatgtctttagaaatcta 356
Query: 61 aatagttgaactgggatagagatgaacagaaagatgactgtttc-gagaaag-aagtcag 118
|||| || ||||||||||||||||||||||||| |||| ||||| ||||||| |||||||
Sbjct: 355 aatattttaactgggatagagatgaacagaaaggtgacggtttccgagaaaggaagtcag 296
Query: 119 acaactttgctccaaaggcttttaaaaaacgcacaaggcccagtctttctctaaccccga 178
|| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 295 ac---tttgctccaaagacttttaaaaaactcacaaggcccagtctttctctaaccccaa 239
Query: 179 gatctgcttccatctatgtagacatagttctttttttt-------ctaattttaagttta 231
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 238 gatctgcttccatctatgtagacatagttctttttttttttttttctaattttaagttta 179
Query: 232 cttttacatggtgtcttgtctgtttgtatgtctgtgcaccatatgtatgcagttcctgtg 291
||||||||||| |||||| |||| |||||| |||||||||||||| ||||||||||||||
Sbjct: 178 cttttacatggcgtcttgcctgtatgtatgcctgtgcaccatatgcatgcagttcctgtg 119
Query: 292 gag 294
|||
Sbjct: 118 gag 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no152_j21.g1 MSMg01no152_j21.g1 CHROMAT_FILE:
MSMg01no152_j21.g1 PHD_FILE: MSMg01no152_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:45 2005
(249 letters)
>mm_chr10_22439020_22439669
Length = 650
Score = 472 bits (244), Expect = e-138
Identities = 247/248 (99%), Gaps = 1/248 (0%)
Strand = Plus / Minus
Query: 1 attttcagcagaaggaatagataacctggctaacatttatatataagagctttatgaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attttcagcagaaggaatagataacctggctaacatttatatataagagctttatgaatc 389
Query: 61 ggg-aaaatgatccttgatataaaagttatctttaaagaagtataactggttagcagtat 119
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gggaaaaatgatccttgatataaaagttatctttaaagaagtataactggttagcagtat 329
Query: 120 ttaaagagcttaccctcattaatatgcaggaaaatcaactcatggggtattggctagttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttaaagagcttaccctcattaatatgcaggaaaatcaactcatggggtattggctagttt 269
Query: 180 tgtatctcaagttgtcaaagatatcactatcattgctttattttgtaagtataggggttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgtatctcaagttgtcaaagatatcactatcattgctttattttgtaagtataggggttt 209
Query: 240 ttgcctgc 247
||||||||
Sbjct: 208 ttgcctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 650
Length adjustment: 9
Effective length of query: 240
Effective length of database: 641
Effective search space: 153840
Effective search space used: 153840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
