Query= MSMg01no153_b12.b1 MSMg01no153_b12.b1 CHROMAT_FILE:
MSMg01no153_b12.b1 PHD_FILE: MSMg01no153_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:23 2005
(633 letters)
>mm_chr10_72797427_72798459
Length = 1033
Score = 1079 bits (558), Expect = 0.0
Identities = 616/636 (96%), Gaps = 3/636 (0%)
Strand = Plus / Plus
Query: 1 gaaaagtagccactaaattcaaagcttttagacaaaaccaattcaaaaggatttgttctc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 198 gaaaagtagccactaaattcaaagcttttagacaaaaccaattcaaaacgatttgttttc 257
Query: 61 agcatgtcttgtctcaaagtcataattagcattgctatagcgtttatatcagtctgcatc 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 258 agcatgtcttgtctcaaagtcataattagcattgctatagcatttatatcagtctgcatc 317
Query: 121 tagcactgtccatgtgtttcaataggaacacagtaatgatgtgaaacaagagactggcct 180
|||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 318 tagcactgcccatgtgtttcaacaggaacacagtaatgatgtgaaacaagagattggcct 377
Query: 181 caatgtgtaaacttcacactaatattaacatagttcctaaattctaaataataagtagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caatgtgtaaacttcacactaatattaacatagttcctaaattctaaataataagtagaa 437
Query: 241 cacaatttatggaaccctccttttctatattttagcataatcagttcaactatgacagca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 cacaatttatggaaccctccttttctatattttagcataatcagttcaactatgacagaa 497
Query: 301 tctactctctcttttttt--cttcataattaaactctgacttatagaatgccagttagat 358
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |
Sbjct: 498 tctactctctctttttttttcttcataattgaactctgacttatagaatgccagttagtt 557
Query: 359 ttttttta-ttagtcatgaaattgaggtaaaattattttttataaaaaaaaaatctacat 417
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttttttaattagtcatgaaattgaggtaaaattattttttataaaaaaaaaatctacat 617
Query: 418 gtgtatatttaaaccactcagttccaagcaaacatgtctctggaaagaaatgaaacaaac 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atgtatatttaaaccactcagttccaagcaaacatgtctctggaaagaaatgaaacaaac 677
Query: 478 cccaagtgatgatagttgtaatgataataacaatagtaaaccagaagcaaggtttccttt 537
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 678 cccaagtgatgatagttgtaatgataataacaataataaaccagaagcaaggtttccttt 737
Query: 538 cttctcatgagagagcggtataacagtggagaatgtccattcatgccaccagggcttctt 597
||||||| |||| ||| ||||||||||||||||||||| |||||||||||| | ||||||
Sbjct: 738 cttctcaggagatagcagtataacagtggagaatgtcctttcatgccaccatgtcttctt 797
Query: 598 tgtggccatctcagccatgttcatttgctaagcata 633
||||||||||||||||||||||||||||||||||||
Sbjct: 798 tgtggccatctcagccatgttcatttgctaagcata 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_b12.g1 MSMg01no153_b12.g1 CHROMAT_FILE:
MSMg01no153_b12.g1 PHD_FILE: MSMg01no153_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:23 2005
(282 letters)
>mm_chr10_72858477_72859158
Length = 682
Score = 453 bits (234), Expect = e-132
Identities = 275/300 (91%), Gaps = 18/300 (6%)
Strand = Plus / Minus
Query: 1 aactatttccttcaaatactctgaattgtaagaggtttatgaataggaaaggggatctta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 682 aactatttccttcaaatactctgaattgtaagaggtttatgaatagggaaggggatctta 623
Query: 61 t------------------gtggagattataggcaactgatgactgctaacggagaggta 102
| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 622 tagagtcacacacctggaggtggagattataggcaactgatgactgctaacgaagaggta 563
Query: 103 gcctctctcacaaatgaacactatcactggttattcaatacaacctggtcatcctgaaaa 162
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcctctctcaggaatgaacactatcactggttattcaatacaacctggtcatcctgaaaa 503
Query: 163 ccacatacatacaaataacaaaaatgaacccacagattttagtcataataatgcaggagg 222
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 502 ccacatacatacaaataacaaaaatggaccaacagattttagtcataataatgcagaagg 443
Query: 223 tttaagagtaggggctttgagaggagttgaggtgaaatatttgagaggaactggatggat 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttaagagtaggggctttgagaggagttgaggtgaaatatttgagaggaactggatggat 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
