Query= MSMg01no153_g21.b1 MSMg01no153_g21.b1 CHROMAT_FILE:
MSMg01no153_g21.b1 PHD_FILE: MSMg01no153_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:48 2005
(672 letters)
>mm_chr10_106313595_106314667
Length = 1073
Score = 1205 bits (623), Expect = 0.0
Identities = 653/663 (98%), Gaps = 3/663 (0%)
Strand = Plus / Plus
Query: 4 ggaattccattaattatgctccatttaaatacagtgctgaccttagccaaggataattca 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccattaattatgctacatttaaatacagtgctgaccttagccaaggataattca 263
Query: 64 atatattcattgttgcaagtatagtattacatattagctctgctttaaaatgacttttcc 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 264 atatattcattgttgcaagtatagtattacatattagctctgctataaaatgacttttcc 323
Query: 124 ttggaagacccagatcagcatctattcaccccacatacagcattgacaataagaaaaaaa 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttggaagacccagagcagcatctattcaccccacatacagcattgacaataagaaaaaaa 383
Query: 184 aa-gccatctagagtttagcttggtggtctaatgagtttattcaattactttcaaaagaa 242
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaagccatctagagtttagcttggtggtctaatgagtttattcaattactttcaaaagaa 443
Query: 243 tgggtgactccaaggtagctaccatcactaaaatgtctaactcaaatgtcttagtcaggg 302
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgggtgactgcaaggtagctaccatcactaaaatgtctaactcaaatgtcttagtcaggg 503
Query: 303 tttctattcctctccaaaacataatgaccaagaagcaagttagggaggagagggcttatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttctattcctctccaaaacataatgaccaagaagcaagttagggaggagagggcttatt 563
Query: 363 tagcttacacttccacattgctgtggctcatcaccaaaagaagtcaggacaggaactcac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagcttacacttccacattgctgtggctcatcaccaaaagaagtcaggacaggaactcac 623
Query: 423 acacggcggggcgggaacctagagccaggagctgatgcagagaccatggaaggacactgc 482
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acacggccgggcgggaacctagagccaggagctgatgcagagaccatggaaggacactgc 683
Query: 483 tcactagactgcttcccctggcttgttcagcttgctttcttatagaactcagtactacca 542
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 684 tcactagactgcttcccctggcttgctcagcttgctttcttatagaactcactactacca 743
Query: 543 gcccagggaagccaccgctcacaatgagacctact-cctttgatcactaattgagaaaat 601
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 744 gcccagggaagccaccgctcacaatgagacctacttcctt-gatcactaattgagaaaat 802
Query: 602 gccttacagctgtatctggtgaaggcatttcctcaggggaggattctttctctgtgataa 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gccttacagctgtatctggtgaaggcatttcctcaggggaggattctttctctgtgataa 862
Query: 662 ctc 664
|||
Sbjct: 863 ctc 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1073
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1063
Effective search space: 703706
Effective search space used: 703706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_g21.g1 MSMg01no153_g21.g1 CHROMAT_FILE:
MSMg01no153_g21.g1 PHD_FILE: MSMg01no153_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:48 2005
(645 letters)
>mm_chr10_106491176_106492220
Length = 1045
Score = 1216 bits (629), Expect = 0.0
Identities = 641/645 (99%)
Strand = Plus / Minus
Query: 1 gtttgaactcatcagaaaggagaggtagagagaagagatgagaactgccaacagctgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gtttgaactcatcagaaaggagaggtagagagaagagatgagaactgccaacagctgtgt 786
Query: 61 gccctagttccttctcacaggcctcctgtgctcattgtttttgaacaatcattttatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gccctagttccttctcacaggcctcctgtgctcattgtttttgaacaatcattttatttt 726
Query: 121 taaagccataatccttgtggttgcccattgggcccttcaggttcctcagctgtggctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 taaagccataatccttgtggttgcccattgggcccttcaggttcctcagctgtggctctc 666
Query: 181 tctgtctgaaatagcataattgtagatatctacttggccttctacatgtctttgctagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tctgtctgaaatagcataattgtagatatctacttggccttctacatgtctttgctagaa 606
Query: 241 tgcggtttccttggggatatctctacttattgtcccattgacagctactcctgcctctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgcggtttccttggggatatctctacttattgtcccattgacagctactcctgcctctcc 546
Query: 301 caggagactgatggtctttgaacaaaacacgtgcacacatactcaattacaagttttcat 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 545 caggagactgatggtctttgaacaaaacacgtgcacacatattcaattacaagttttcat 486
Query: 361 ttttctaaaattaaatatcaagatagtagcatcttttttttcacagctctgctctatcat 420
|||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||
Sbjct: 485 ttttctaaaattaaatatcaagatggtagcgtctttttttccacagctctgctctatcat 426
Query: 421 ctaaatgaagagggagcaaaagagtaaggagaaagaagtggagggagggaggtcagacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctaaatgaagagggagcaaaagagtaaggagaaagaagtggagggagggaggtcagacac 366
Query: 481 tgttcctattttggtagaaacattttgaagaacagcttttaagggatagaatattggact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgttcctattttggtagaaacattttgaagaacagcttttaagggatagaatattggact 306
Query: 541 tatactgaagtctgggcacacagcctgctgtaattgggtgtagaaagtttgcttgcagta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tatactgaagtctgggcacacagcctgctgtaattgggtgtagaaagtttgcttgcagta 246
Query: 601 aattacacatgtgtttatgagctgttttggtatatttttactaga 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aattacacatgtgtttatgagctgttttggtatatttttactaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
