Query= MSMg01no154_e07.b1 MSMg01no154_e07.b1 CHROMAT_FILE:
MSMg01no154_e07.b1 PHD_FILE: MSMg01no154_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:51 2005
(486 letters)
>mm_chr10_71890222_71891107
Length = 886
Score = 911 bits (471), Expect = 0.0
Identities = 480/483 (99%), Gaps = 1/483 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcaagactctggcatttggtattacagtctcaggatttatgaaactatcaata 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gaattcttcaagacaatggcatttggtattacagtctcaggatttatgaaactatcaata 717
Query: 65 ttctttccattaaaaaaa-aataattaaaacactcaaaagcccacgttcttttagacttc 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ttctttccattaaaaaaacaataattaaaacactcaaaagcccacgttcttttagacttc 657
Query: 124 atgcaaacagaattatttgtgagtcatagttaaaattagtctcagcagttctacttctta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atgcaaacagaattatttgtgagtcatagttaaaattagtctcagcagttctacttctta 597
Query: 184 gggccattctctcttgctctggtcatattttactgcaatcattgtgatttcaatgctgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gggccattctctcttgctctggtcatattttactgcaatcattgtgatttcaatgctgta 537
Query: 244 caaattctgtgcctttacttctccagttctatcattatttaagcaaattttacttgtatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 caaattctgtgcctttacttctccagttctatcattatttaagcaaattttacttgtatt 477
Query: 304 ttgaaggtgtacaagactcagaaacatcgggagtggaatatacagaacccttttacccac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ttgaaggtgtacaagactcagaaacatcgggagtggaatatacagaacccttttacccac 417
Query: 364 agcgactcagatttttagcctgggttgggacatgcaatccctagtaagctgtgtaccatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agcgactcagatttttagcctgggttgggacatgcaatccctagtaagctgtgtaccatg 357
Query: 424 actttcttgtgtttggtactaggcttcctgatgttggcatttggagcatcttataggaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 actttcttgtgtttggtactaggcttcctgatgttggcatttggagcatcttataggaaa 297
Query: 484 ggg 486
|||
Sbjct: 296 ggg 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_e07.g1 MSMg01no154_e07.g1 CHROMAT_FILE:
MSMg01no154_e07.g1 PHD_FILE: MSMg01no154_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:51 2005
(530 letters)
>mm_chr10_71756692_71757621
Length = 930
Score = 986 bits (510), Expect = 0.0
Identities = 525/530 (99%)
Strand = Plus / Plus
Query: 1 atttgagtcaacatatcaagttgaaatgggactaatgtcagagattaaaatgggtaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgagtcaacatatcaagttgaaatgggactaatgtcagagattaaaatgggtaaaaa 260
Query: 61 taagcaagaagagtgttagataaaacattgaatttagaaatttgatatctgccaaagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagcaagaagagtgttagataaaacattgaatttagaaatttgatatctgccaaagata 320
Query: 121 ttgaattaatctagagaccttaggatgaacagtttgtaaagaaaatgattttttttgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaattaatctagagaccttaggatgaacagtttgtaaagaaaatgattttttttgtac 380
Query: 181 acttagaactgaagtctcccacacaaaattaagggttatagaatgccaggattagaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttagaactgaagtctcccacacaaaattaagggttatagaatgccaggattagaattc 440
Query: 241 tttaagccagagaatttaactacattaatgaataaagcttgcatttattggaaaggaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 tttaagccagagaatttaactacattaatgaataaagcttgcatttattggaaagaaaaa 500
Query: 301 agcacataccctaaaaatgaaggtatttctaaaatatttaacatgatgttaccaataata 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcacatactctaaaaatgaaggtatttctaaaatatttaacatgatgttaccaataata 560
Query: 361 atgctaatgattagctgcacaggcccctgcttgagaaaagtgtaaccattttgcaaggac 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgctaatgattagctgcacgggcccctgcttgagaaaagtgtaaccattttgcaaggac 620
Query: 421 attattttgattggccagatcccaaaccctatgaaataaacaaagcccttaatatcattc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 attattttgattggccagatcccaaaccctatgaaataaacaaagcccttaataccattc 680
Query: 481 ataggatttccacccctcctcctttggcagctgatgctggactgtttctt 530
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 ataggatttccacccctcctcctttggcagctgatgctgaactgtttctt 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
