Query= MSMg01no154_n20.b1 MSMg01no154_n20.b1 CHROMAT_FILE:
MSMg01no154_n20.b1 PHD_FILE: MSMg01no154_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:37 2005
(456 letters)
>mm_chr10_109968413_109969268
Length = 856
Score = 714 bits (369), Expect = 0.0
Identities = 432/453 (95%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 5 gaattcactcttgttcaaggtctgacctgctaatgtttcttgccttccaagacccaccca 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcttgctgaaggtctgacctgctaatgtttcttgccttccaagacccaccca 264
Query: 65 acacctgcaactctagccccacagacttttgggagctctaatacttctttaagataaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acacctgcaactctagccccacagacttttgggagctctaatacttctttaagataaagc 324
Query: 125 gctcatgtgtccttcttactggttggaacatcttctggatatatgcccaggagaggtact 184
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 325 gctcatatgtccttcttaccggttggaacatcttctggatatatgcccaggagaggtgct 384
Query: 185 gcaggatcctccagtagtgctatgtccaattttctgaggaaccgccagacttatttccag 244
|| ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 385 gcgggatcctccagtagtactatgtccaattttctgaggaaccaccagactgatttccag 444
Query: 245 agtggttgtacaagcttgcaatcccaccaacaatggaggagtgttcctttttctccacat 304
||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||
Sbjct: 445 agtggttgtacaagcttgcaatcccaccagcaatggaggagtgttcctcttcctccacat 504
Query: 305 ccacgccagcatctcctgtcacctgaattcttgatcttagctattctgactggtgtgagg 364
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 505 cctcgtcagcatctcctgtcacctgaattcttgatcttagccattctgactggtgtgcgg 564
Query: 365 cggaatctcagggctgttttgatttgcatttccctgatgattaaggatgttgaatatttt 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 565 tggaatctcagggttgttttgatttgcatttccctgatgattaaggatgttgaacatttt 624
Query: 425 tt-ctactatgttcatagcagccttatttataa 456
|| | ||||||||||||||||||||||||||||
Sbjct: 625 tttccactatgttcatagcagccttatttataa 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_n20.g1 MSMg01no154_n20.g1 CHROMAT_FILE:
MSMg01no154_n20.g1 PHD_FILE: MSMg01no154_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:37 2005
(468 letters)
>mm_chr10_110109137_110110003
Length = 867
Score = 853 bits (441), Expect = 0.0
Identities = 453/457 (99%), Gaps = 1/457 (0%)
Strand = Plus / Minus
Query: 12 gggcgatacagagaaaccctgtcttgaattaacaaaaaacaaaacaaaaaagatacagag 71
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 704 gggcgatacagagaaaccctgtcttgaaaaaacaaaaaacaaaacaaaaaagatacagag 645
Query: 72 actatcataaataatggcaatgaatcataaatagcttattgttgaaaccatctgttgtga 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 actatcataaataatggcaatgaatcataaatagcttattgttgaaaccatctgttgtga 585
Query: 132 gataggtagtaaaattacagagtccttctttcttctttattccaccatggcaactttgga 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gataggtagtaaaattacagagtccttctttcttctttattccaccatggcaactttgga 525
Query: 192 tttgatttaaaaacaatgaagaattattgatcaccttcatacaggagaaaggatcagatt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tttgatttaaaaacaatgaagaattattgatcaccttcatacaggagaaaggatcagatt 465
Query: 252 taaattatccacaatacatgctagaaagagtaaggagagtgtgtgtgaggtactaagggt 311
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 464 taaattatccacaatacatgttagaaagagtaaggagagtgtgtgtgaggtactaagggt 405
Query: 312 agactctagaagatcatttaagaagttatgagaaaaattgatgccaaaaaaaagaggaaa 371
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 404 agactctagaagatcatttaagaagttatgagaaaaattgatgcc-aaaaaaagaggaaa 346
Query: 372 aaaaacccaccctaagaaggatgacaattgaatggttgcttctgtaaagagattggaaag 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aaaaacccaccctaagaaggatgacaattgaatggttgcttctgtaaagagattggaaag 286
Query: 432 gacatggacatagctatcgactgcctggcttcttgag 468
|||||||||||||||||||||||||||||||||||||
Sbjct: 285 gacatggacatagctatcgactgcctggcttcttgag 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
