Query= MSMg01no155_d06.b1 MSMg01no155_d06.b1 CHROMAT_FILE:
MSMg01no155_d06.b1 PHD_FILE: MSMg01no155_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:04 2005
(522 letters)
>mm_chr10_60971190_60972111
Length = 922
Score = 1009 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Plus
Query: 1 aaaagaaggaggagatggtgtctccctcttgaaatggtctggtttaggggttcagcgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagaaggaggagatggtgtctccctcttgaaatggtctggtttaggggttcagcgtgt 260
Query: 61 gaccagaaattaacatgaatgaatccagagtctatccactggcacggaggagccaacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaccagaaattaacatgaatgaatccagagtctatccactggcacggaggagccaacact 320
Query: 121 cagaagttctttccagggaatacagcttgggtgggagagcaagtgcctagcatgtgcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaagttctttccagggaatacagcttgggtgggagagcaagtgcctagcatgtgcgag 380
Query: 181 gctctgagttcaatccccgccactgcatagaactgagtgtgttggcttctacttctaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctctgagttcaatccccgccactgcatagaactgagtgtgttggcttctacttctaaac 440
Query: 241 ccaaccaccagaaccagggagatcagaagttcaaggtcaatctcagctaggcctggtctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaccaccagaaccagggagatcagaagttcaaggtcaatctcagctaggcctggtctc 500
Query: 301 aagaaaaagtttcagttttttccgtctaactgccctgttagcatgcaccagggtaaagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagaaaaagtttcagttttttccgtctaactgccctgttagcatgcaccagggtaaagcc 560
Query: 361 acccagctggagggagacctgatctctgtgattctcaaactgggcaccagatacccttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acccagctggagggagacctgatctctgtgattctcaaactgggcaccagatacccttta 620
Query: 421 aggcccctgaaggcacaggtacctgggctccagtccctataggtctggggtggagtctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggcccctgaaggcacaggtacctgggctccagtccctataggtctggggtggagtctgg 680
Query: 481 gaatttactttgctaacaagttctgagatgatactgtgaatc 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaatttactttgctaacaagttctgagatgatactgtgaatc 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_d06.g1 MSMg01no155_d06.g1 CHROMAT_FILE:
MSMg01no155_d06.g1 PHD_FILE: MSMg01no155_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:04 2005
(522 letters)
>mm_chr10_61062601_61063522
Length = 922
Score = 851 bits (440), Expect = 0.0
Identities = 503/526 (95%), Gaps = 4/526 (0%)
Strand = Plus / Minus
Query: 1 aagtgagtttccgttacagagtgagttttaggccagcttgggctacatgaaaccttgttt 60
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aagtgggtttccattacagagtgagttttaggccagcttgggctacatgaaaccttgttt 665
Query: 61 ccaaacaaacaatagaaaatgggcctgaagaagaaagacaaaaccagcagaggcagaccc 120
||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct: 664 ccaaacaaacaatagaaaaccggcctgaagaaggaagacaaaacccgcagaggcagaccc 605
Query: 121 agagctactctggactcagctaaggaaccattcttctgcaacacttcctaacaccctgtc 180
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 604 agagctactctggacgcagctaaggaaccgttcttctgcaacacttcctaacaccgtgtc 545
Query: 181 agcacccagagcttcagtgtccctgacccaagtgggtttcttctctctagcttcttagca 240
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 544 agcacccggagcttcagtgtccctgacccaagtgggtctcttctctctagcttcttagca 485
Query: 241 gcagcttgttgaggaaagatttcagtggagcaggaaggatggctaagcagtgagctgcag 300
||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 484 gcagcttcttgaggaaagatttcggtggagcaggaaggatggcgaagcagtgagctgcag 425
Query: 301 tgtgagttcctggcacccactttgggttgtggggtgggggctggggctgcagctgcaggg 360
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 tgtgagttcccggcacccactttgggttgtggggtgggggccggggctgcagctgcaggg 365
Query: 361 gatctgacaccctttctaggcctgggggaaggtctgccctcatctgtagatacaccccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gatctgacaccctttctaggcctgggggaaggtctgccctcatctgtagatacaccccca 305
Query: 421 ctccacccccacatacgtaattaattaattaatt----ttttgagacaaggtttctctgt 476
||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 304 ctccacccccacatatgtaattaattaattaattaattttttgagacaaggtttctctgt 245
Query: 477 atagccttaactgtcctgcaattctgtttaaaaaaaaaaaaaaaaa 522
||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 244 atagccttacctgtcctggaattctgtttaaaaaaaaaaaaaaaaa 199
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
