Query= MSMg01no156_c17.b1 MSMg01no156_c17.b1 CHROMAT_FILE:
MSMg01no156_c17.b1 PHD_FILE: MSMg01no156_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:14 2005
(314 letters)
>mm_chr10_77521183_77521892
Length = 710
Score = 569 bits (294), Expect = e-166
Identities = 305/310 (98%), Gaps = 4/310 (1%)
Strand = Plus / Minus
Query: 5 gaattctttcaccatataaaatattttcatgaaccagattcaacagagaaacaaaaactt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaattctttcaccatataaaatattttcatgaaccagattcaacagagaaacaaaaactt 315
Query: 65 gacaaagatcctgaaaaaaaaaataaaagaagagaaaaaacaacagatcaaactcctttt 124
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 314 gacaaagatcctgaaaaaaaa---aaaa-aagagaaaaaacaacagatcaaactcctttt 259
Query: 125 acacctatcaattctaaagtcctagctttaaaaatgttaaaagaatagcacactgggggc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 258 acacctatcaattctaaagtcctagctttaaaaatgttaaaagaatagcacactaggggc 199
Query: 185 tggagagatggctcagtggttatgagcaccatctgctcttccaaagaacttgggttcaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tggagagatggctcagtggttatgagcaccatctgctcttccaaagaacttgggttcaat 139
Query: 245 tcccagcacccacctggcaactcacaactgtctgtaactccagttccaagggatctgaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tcccagcacccacctggcaactcacaactgtctgtaactccagttccaagggatctgaca 79
Query: 305 cccccacatc 314
||||||||||
Sbjct: 78 cccccacatc 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 710
Length adjustment: 9
Effective length of query: 305
Effective length of database: 701
Effective search space: 213805
Effective search space used: 213805
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_c17.g1 MSMg01no156_c17.g1 CHROMAT_FILE:
MSMg01no156_c17.g1 PHD_FILE: MSMg01no156_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:14 2005
(235 letters)
>mm_chr10_77363819_77364453
Length = 635
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Plus
Query: 1 tgagaaggctgctggcccaatggcctcaatggcattatgggacaggtccagctccctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagaaggctgctggcccaatggcctcaatggcattatgggacaggtccagctccctcag 260
Query: 61 ctgaggcaggtgttggaaggctccattggggactcgggagattctgttggcgtctagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaggcaggtgttggaaggctccattggggactcgggagattctgttggcgtctagttt 320
Query: 121 cagaatcaccgtgtcggctgggatgtccctagggatctcctgcagccctcttgagctgca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaagcaccgtgtcggctgggatgtccctagggatctcctgcagccctcttgagctgca 380
Query: 181 atggacagccacggccccagcatggtcagggcactggcaggcctgtgggcagga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggacagccacggccccagcatggtcagggcactggcaggcctgtgggcagga 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
