Query= MSMg01no156_j19.b1 MSMg01no156_j19.b1 CHROMAT_FILE:
MSMg01no156_j19.b1 PHD_FILE: MSMg01no156_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:47 2005
(288 letters)
>mm_chr10_13864714_13865403
Length = 690
Score = 526 bits (272), Expect = e-154
Identities = 285/290 (98%), Gaps = 2/290 (0%)
Strand = Plus / Minus
Query: 1 catgttaaatcaatggctttgttttcatgacatggttacctgaatgtgttccattgactc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 490 catgttaaatcaatggctttgttttcatgacatggtaacctgaatgtgttccattgactc 431
Query: 61 atagaagccagttatggtctgcttggccaaaagctgactcaaaagcctcaggaaggaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atagaagccagttatggtctgcttggccaaaagctgactcaaaagcctcaggaaggaggg 371
Query: 121 atcaggactagtttagcgcaccctgccagcatcaccatgtctctgtcacaggaatcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atcaggactagtttagcgcaccctgccagcatcaccatgtctctgtcacaggaatcatca 311
Query: 181 gagggatttccagcttcctagtaactatatagtgacttaggtagcacaagatatagaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gagggatttccagcttcctagtaactatatagtgacttaggtagcacaagatatagaaac 251
Query: 241 ttgcagagatgttttgttttttt--cctagcttgctaatttactagcttg 288
|||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 250 ttgcagagatgtgatgttttttttccctagcttgctaatttactagcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 690
Length adjustment: 9
Effective length of query: 279
Effective length of database: 681
Effective search space: 189999
Effective search space used: 189999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no156_j19.g1 MSMg01no156_j19.g1 CHROMAT_FILE:
MSMg01no156_j19.g1 PHD_FILE: MSMg01no156_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:47 2005
(291 letters)
>mm_chr10_13795763_13796453
Length = 691
Score = 499 bits (258), Expect = e-146
Identities = 282/290 (97%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 aaacaccaggtggaagggataggatttttatctcgttttgggttttcttgtctgtatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacaccaggtggaagggataggatttttatctcgttttgggttttcttgtctgtatttt 260
Query: 61 ttttaaagaggttattacaagcacctagaacaacagaacaatttttatgcaactacccat 120
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaatgaggttattacaagcacctggaacaacagaacaatttttatgcaactacccat 320
Query: 121 attactgaattagatgatgatataaccttgaatttcgagaaatagaagtagtgctggagt 180
|||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 321 attattgaattagatgatgatataaccttgaatttcaagaaatagaagaagtgctggaga 380
Query: 181 cgggcatggtggcgcacgcctttgatcccaacacttgggaggaggaggcaggcggatttc 240
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 cgggcatggtggcgcacgcctttgatcccaacacttgggagc-ggaggcaggcggatttc 439
Query: 241 tgagtttgaggtcagcctggtcaacagagtgagttccaggacagccaggg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgagtttgaggtcagcctggtcaacagagtgagttccaggacagccaggg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
