Query= MSMg01no156_o05.b1 MSMg01no156_o05.b1 CHROMAT_FILE:
MSMg01no156_o05.b1 PHD_FILE: MSMg01no156_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:07 2005
(322 letters)
>mm_chr10_129066934_129067655
Length = 722
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%)
Strand = Plus / Plus
Query: 5 gaattctaattttggctagtctcttaattaaggtggtcttttacaaagagcatttgtttt 64
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctcattttggctagtctcttaattaaggtagtcttttacaaagagcatttgtttt 264
Query: 65 gtttaagtacaggacaagttgcactggagatggcttaagacatgcagcagtttggaaaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttaagtacaggacaagttgcactggagatggcttaagacatgcagcagtttggaaaca 324
Query: 125 ctaaacctggaaagtgtgttgcatctgtgcatgtgaggtcatggagaggatggaggctgg 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctaaacatggaaagtgtgttgcatctgtgcatgtgaggtcatggagaggatggaggctgg 384
Query: 185 ttttgaacgatgtagcttggttaaattgctttgtttatcagagcatctaggatatgattc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttgaacgatgtagcttggttaaattgctttgtttatcagagcatctaggatatgattc 444
Query: 245 aagatataagatttaatgggaattggtagagtacacatactttctgtttagatgactaaa 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 aagatataagatttaatgggaattggtagagtacacatactttctttttagatgactaaa 504
Query: 305 cagaggagttccttattt 322
||||||||||||||||||
Sbjct: 505 cagaggagttccttattt 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_o05.g1 MSMg01no156_o05.g1 CHROMAT_FILE:
MSMg01no156_o05.g1 PHD_FILE: MSMg01no156_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:07 2005
(563 letters)
>mm_chr10_129186797_129187763
Length = 967
Score = 1069 bits (553), Expect = 0.0
Identities = 562/567 (99%), Gaps = 4/567 (0%)
Strand = Plus / Minus
Query: 1 aagatgaaggaacctctgtactgtcttgccctgtcacaatgctctgtgctctttaactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 aagatgaaggaacctctgtactgtcttgccctgtcacaatgctctgtgctctttaactaa 708
Query: 61 aattcgataatatagtagtctccttacagacaagtctatttacactagagtctaattgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aattcgataatatagtagtctccttacagacaagtctatttacactagagtctaattgta 648
Query: 121 atttgtgtttgcaaagcatgagatacagttcttggacagcctttaattagcaggaagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atttgtgtttgcaaagcatgagatacagttcttggacagcctttaattagcaggaagaat 588
Query: 181 ctaaatgtatatgcatacattagagtacacggattttatttgtgtagaatattcttgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ctaaatgtatatgcatacattagagtacacggattttatttgtgtagaatattcttgcag 528
Query: 241 gcagaaataatttaaaagagttttagaaggatattaattatttactgaagctgtttcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gcagaaataatttaaaagagttttagaaggatattaattatttactgaagctgtttcaat 468
Query: 301 tttctttgcttgtttattggttgattcctaattagcatttttaaccccaagaacaatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttctttgcttgtttattggttgattcctaattagcatttttaaccccaagaacaatttt 408
Query: 361 attaaaacttaaaagtttttaccttcaggccagacaaactaaactttaacatctaccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 attaaaacttaaaagtttttaccttcaggccagacaaactaaactttaacatctaccaag 348
Query: 421 aggggaatggatgaaaataaaaaggaggaaacaaaaagccaaccaaacaaatgaaaccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aggggaatggatgaaaataaaaaggaggaaacaaaaagccaaccaaacaaatgaaaccaa 288
Query: 481 aacagacaaaaaaaa----tggcatttgaattaccaccagtctgtagatctgacacataa 536
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aacagaaaaaaaaaaaaaatggcatttgaattaccaccagtctgtagatctgacacataa 228
Query: 537 tataaggtagcctcagagttgggaaga 563
|||||||||||||||||||||||||||
Sbjct: 227 tataaggtagcctcagagttgggaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 967
Length adjustment: 10
Effective length of query: 553
Effective length of database: 957
Effective search space: 529221
Effective search space used: 529221
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
