Query= MSMg01no157_a12.b1 MSMg01no157_a12.b1 CHROMAT_FILE:
MSMg01no157_a12.b1 PHD_FILE: MSMg01no157_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:18 2005
(312 letters)
>mm_chr10_15569354_15570065
Length = 712
Score = 572 bits (296), Expect = e-168
Identities = 308/318 (96%), Gaps = 10/318 (3%)
Strand = Plus / Minus
Query: 5 gaattcaaataaatatttgaaaattatttactttagaaaggattttcctttacaaagttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaattcaaataaatatttgaaaattatttactttagaaaggattttcctttacaaagttt 406
Query: 65 catattaaaattatttctggttgagattaaaatgtcttatatttttaaataagtgactag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 catattaaaattatttctggttgagattaaaatgtcttatatttttaaataagtgactag 346
Query: 125 tgcattcagagttatctcagtcattcagagaacttgaagctctagcagaggacaccagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgcattcagagttatctcagtcattcagagaacttgaagctctagcagaggacaccagtt 286
Query: 185 ttttccaagaatcttcttggatgtgtcacacataaaaaaccttcttgtggccataacaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttttccaagaatcttcttggatgtgtcacacataaaaaaccttcttgtggccataacaag 226
Query: 245 tacgtgtatacatctggtattt----------gtgtgtgtgtgtgtgtgtgtgtgtgtaa 294
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 225 tacgtgtatacatctggtatttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaa 166
Query: 295 ataaatggaaggatcatt 312
||||||||||||||||||
Sbjct: 165 ataaatggaaggatcatt 148
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_a12.g1 MSMg01no157_a12.g1 CHROMAT_FILE:
MSMg01no157_a12.g1 PHD_FILE: MSMg01no157_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:18 2005
(188 letters)
>mm_chr10_15453776_15454363
Length = 588
Score = 348 bits (180), Expect = e-100
Identities = 186/188 (98%)
Strand = Plus / Plus
Query: 1 agacaatttccttttgtctacagtgttcacagtaaactaggtgcaggttactctagaaat 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 agacaatttccttttgtctacagtgttcacagtaaactatgtgcaggttactctagaaat 260
Query: 61 atgtaaatgaagccacagtgttggattgcttctgagttcagaatttccatttactattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtaaatgaagccacagtgttggattgcttctgagttcagaatttccatttactattta 320
Query: 121 agccatctcttggaagtggtaagtaaatatttaatagattgtaatgatattacaataatt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccatctcttggaagttgtaagtaaatatttaatagattgtaatgatattacaataatt 380
Query: 181 atatcagt 188
||||||||
Sbjct: 381 atatcagt 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
